Literature DB >> 31005439

Next-Generation Sequencing vs Culture-Based Methods for Diagnosing Periprosthetic Joint Infection After Total Knee Arthroplasty: A Cost-Effectiveness Analysis.

Michael T Torchia1, Daniel C Austin1, Samuel T Kunkel1, Kevin W Dwyer2, Wayne E Moschetti2.   

Abstract

BACKGROUND: Periprosthetic joint infection (PJI) after total knee arthroplasty is challenging to diagnose. Compared with culture-based techniques, next-generation sequencing (NGS) is more sensitive for identifying organisms but is also less specific and more expensive. To date, there has been no study comparing the cost-effectiveness of these two methods to diagnose PJI after total knee arthroplasty.
METHODS: A Markov, state-transition model projecting lifetime costs and quality-adjusted life years (QALYs) was constructed to determine the cost-effectiveness from a societal perspective. The primary outcome was incremental cost-effectiveness ratio, with a willingness-to-pay threshold of $100,000/QALY. Sensitivity analyses were performed to evaluate parameter assumptions.
RESULTS: At our base case values, culture was not determined to be cost-effective compared to NGS, with an incremental cost-effectiveness ratio of $422,784 per QALY. One-way sensitivity analyses found NGS to be the cost-effective choice above a pretest probability of 45.5% for PJI. In addition, NGS was cost-effective if its sensitivity was greater than 70.0% and its specificity greater than 94.1%. Two-way sensitivity analyses revealed that the pretest probability and test performance parameters (sensitivity and specificity) were the largest factors for identifying whether a particular strategy was cost-effective.
CONCLUSION: The results of our model suggest that the cost-effectiveness of NGS to diagnose PJI depends primarily on the pretest probability of PJI and the performance characteristics of the NGS technology. Our results are consistent with the idea that NGS should be reserved for clinical contexts with a high pretest probability of PJI. Further study is required to determine the indications and subgroups for which NGS offers clinical benefit.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cost-effectiveness analysis; next-generation sequencing; periprosthetic joint infection; total knee arthroplasty

Mesh:

Year:  2019        PMID: 31005439     DOI: 10.1016/j.arth.2019.03.029

Source DB:  PubMed          Journal:  J Arthroplasty        ISSN: 0883-5403            Impact factor:   4.757


  10 in total

1.  Comparative study of culture, next-generation sequencing, and immunoassay for identification of pathogen in diabetic foot ulcer.

Authors:  Jason Scott Lipof; Courtney Marie Cora Jones; John Daiss; Irvin Oh
Journal:  J Orthop Res       Date:  2021-02-15       Impact factor: 3.494

2.  The EBJIS definition of periprosthetic joint infection.

Authors:  Martin McNally; Ricardo Sousa; Marjan Wouthuyzen-Bakker; Antonia F Chen; Alex Soriano; H Charles Vogely; Martin Clauss; Carlos A Higuera; Rihard Trebše
Journal:  Bone Joint J       Date:  2021-01       Impact factor: 5.082

3.  What's New in Musculoskeletal Infection.

Authors:  Thomas K Fehring; Keith A Fehring; Angela Hewlett; Carlos A Higuera; Jesse E Otero; Aaron J Tande
Journal:  J Bone Joint Surg Am       Date:  2020-07-15       Impact factor: 6.558

4.  Culture-Negative Streptococcus suis Infection Diagnosed by Metagenomic Next-Generation Sequencing.

Authors:  Yuanyuan Dai; Li Chen; Wenjiao Chang; Huaiwei Lu; Peng Cui; Xiaoling Ma
Journal:  Front Public Health       Date:  2019-12-17

5.  Next-Generation Sequencing for Pathogen Identification in Infected Foot Ulcers.

Authors:  Yoonjung Choi; Eimi Oda; Olivia Waldman; Thomas Sajda; Christopher Beck; Irvin Oh
Journal:  Foot Ankle Orthop       Date:  2021-07-12

Review 6.  Application of leukocyte esterase strip test in the screening of periprosthetic joint infections and prospects of high-precision strips.

Authors:  Qing-Yuan Zheng; Guo-Qiang Zhang
Journal:  Arthroplasty       Date:  2020-10-29

Review 7.  Molecular Approach for the Laboratory Diagnosis of Periprosthetic Joint Infections.

Authors:  Giulia Gatti; Francesca Taddei; Martina Brandolini; Andrea Mancini; Agnese Denicolò; Francesco Congestrì; Martina Manera; Valentina Arfilli; Arianna Battisti; Silvia Zannoli; Maria Michela Marino; Anna Marzucco; Manuela Morotti; Laura Grumiro; Agata Scalcione; Giorgio Dirani; Monica Cricca; Vittorio Sambri
Journal:  Microorganisms       Date:  2022-08-05

8.  Information theory approaches to improve glioma diagnostic workflows in surgical neuropathology.

Authors:  Lokman Cevik; Marilyn Vazquez Landrove; Mehmet Tahir Aslan; Vasilii Khammad; Francisco Jose Garagorry Guerra; Yolanda Cabello-Izquierdo; Wesley Wang; Jing Zhao; Aline Paixao Becker; Catherine Czeisler; Anne Costa Rendeiro; Lucas Luis Sousa Véras; Maicon Fernando Zanon; Rui Manuel Reis; Marcus de Medeiros Matsushita; Koray Ozduman; M Necmettin Pamir; Ayca Ersen Danyeli; Thomas Pearce; Michelle Felicella; Jennifer Eschbacher; Naomi Arakaki; Horacio Martinetto; Anil Parwani; Diana L Thomas; José Javier Otero
Journal:  Brain Pathol       Date:  2022-01-10       Impact factor: 7.611

9.  Metagenomics next-generation sequencing for the diagnosis of central nervous system infection: A systematic review and meta-analysis.

Authors:  Chunrun Qu; Yu Chen; Yuzhen Ouyang; Weicheng Huang; Fangkun Liu; Luzhe Yan; Ruoyu Lu; Yu Zeng; Zhixiong Liu
Journal:  Front Neurol       Date:  2022-09-20       Impact factor: 4.086

Review 10.  Next generation sequencing for pathogen detection in periprosthetic joint infections.

Authors:  Pier F Indelli; Stefano Ghirardelli; Bruno Violante; Derek F Amanatullah
Journal:  EFORT Open Rev       Date:  2021-04-01
  10 in total

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