Literature DB >> 31003606

Demystifying roots: A need for clarification and extended concepts in root phenotyping.

Guillaume Lobet1, Ana Paez-Garcia2, Hannah Schneider3, Astrid Junker4, Jonathan A Atkinson5, Saoirse Tracy6.   

Abstract

Plant roots have major roles in plant anchorage, resource acquisition and offer environmental benefits including carbon sequestration and soil erosion mitigation. As such, the study of root system architecture, anatomy and functional properties is of crucial interest to plant breeding, with the aim of sustainable yield production and environmental stewardship. Due to the importance of the root system studies, there is a need for clarification of terms and concepts in the root phenotyping community. In particular in this contribution, we advocate for the use of a reference naming system (ontologies) for roots and root phenes. Such uniformity would not only allow better understanding of research results, but would also enable a better sharing of data. In addition, we highlight the need to incorporate the concept of plasticity in breeding programs, as it is an essential component of root system development in heterogeneous environments.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Ontology; Phenotyping; Plasticity; Root

Mesh:

Substances:

Year:  2018        PMID: 31003606     DOI: 10.1016/j.plantsci.2018.09.015

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  9 in total

1.  Cortical Cell Diameter Is Key To Energy Costs of Root Growth in Wheat.

Authors:  Tino Colombi; Anke Marianne Herrmann; Pernilla Vallenback; Thomas Keller
Journal:  Plant Physiol       Date:  2019-05-13       Impact factor: 8.340

2.  Developmental plasticity of Brachypodium distachyon in response to P deficiency: Modulation by inoculation with phosphate-solubilizing bacteria.

Authors:  Caroline Baudson; Benjamin M Delory; Stijn Spaepen; Patrick du Jardin; Pierre Delaplace
Journal:  Plant Direct       Date:  2021-01-25

3.  Multiseriate cortical sclerenchyma enhance root penetration in compacted soils.

Authors:  Hannah M Schneider; Christopher F Strock; Meredith T Hanlon; Dorien J Vanhees; Alden C Perkins; Ishan B Ajmera; Jagdeep Singh Sidhu; Sacha J Mooney; Kathleen M Brown; Jonathan P Lynch
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

4.  Dissecting the Root Phenotypic and Genotypic Variability of the Iowa Mung Bean Diversity Panel.

Authors:  Kevin O Chiteri; Talukder Zaki Jubery; Somak Dutta; Baskar Ganapathysubramanian; Steven Cannon; Arti Singh
Journal:  Front Plant Sci       Date:  2022-01-27       Impact factor: 5.753

Review 5.  Phenotyping for waterlogging tolerance in crops: current trends and future prospects.

Authors:  Patrick Langan; Villő Bernád; Jason Walsh; Joey Henchy; Mortaza Khodaeiaminjan; Eleni Mangina; Sónia Negrão
Journal:  J Exp Bot       Date:  2022-09-03       Impact factor: 7.298

Review 6.  Characterization, costs, cues and future perspectives of phenotypic plasticity.

Authors:  Hannah M Schneider
Journal:  Ann Bot       Date:  2022-09-06       Impact factor: 5.040

Review 7.  Root system architecture for abiotic stress tolerance in potato: Lessons from plants.

Authors:  Rasna Zinta; Jagesh Kumar Tiwari; Tanuja Buckseth; Kanika Thakur; Umesh Goutam; Devendra Kumar; Clarissa Challam; Nisha Bhatia; Anuj K Poonia; Sharmistha Naik; Rajesh K Singh; Ajay K Thakur; Dalamu Dalamu; Satish K Luthra; Vinod Kumar; Manoj Kumar
Journal:  Front Plant Sci       Date:  2022-09-23       Impact factor: 6.627

8.  ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture.

Authors:  Nicolás Gaggion; Federico Ariel; Vladimir Daric; Éric Lambert; Simon Legendre; Thomas Roulé; Alejandra Camoirano; Diego H Milone; Martin Crespi; Thomas Blein; Enzo Ferrante
Journal:  Gigascience       Date:  2021-07-20       Impact factor: 6.524

9.  Root angle in maize influences nitrogen capture and is regulated by calcineurin B-like protein (CBL)-interacting serine/threonine-protein kinase 15 (ZmCIPK15).

Authors:  Hannah M Schneider; Vai Sa Nee Lor; Meredith T Hanlon; Alden Perkins; Shawn M Kaeppler; Aditi N Borkar; Rahul Bhosale; Xia Zhang; Jonas Rodriguez; Alexander Bucksch; Malcolm J Bennett; Kathleen M Brown; Jonathan P Lynch
Journal:  Plant Cell Environ       Date:  2021-07-08       Impact factor: 7.947

  9 in total

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