Literature DB >> 30997314

Development and utilization of gyrA and gyrB gene-based diagnostics for the phytoplasma classified under 16Sr I group in plants and insects.

Aundy Kumar1, G P Rao1, S M P Khurana2.   

Abstract

In the present study, a new set of primers of gyrA and gyrB genes of the phytoplasma genome were designed and validated for the successful detection and taxonomic classification of the previously identified phytoplasma strains of 'Candidatus P. asteris' (16SrI-B subgroup) associated with Catharanthus leaf yellows, sesame phyllody and the leafhopper (Hishimonus phycitis). Our results suggested the ability and sensitivity of gyrA and gyrB genes as an alternative molecular marker to identify the Ca. P. asteris strain up to subgroup level associated both with plants and insects.

Entities:  

Keywords:  Leafhopper; Multilocus genes; Phytoplasma detection; Validation

Year:  2019        PMID: 30997314      PMCID: PMC6462283          DOI: 10.1007/s13205-019-1706-8

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  4 in total

1.  Ribosomal protein gene-based phylogeny for finer differentiation and classification of phytoplasmas.

Authors:  M Martini; I-M Lee; K D Bottner; Y Zhao; S Botti; A Bertaccini; N A Harrison; L Carraro; C Marcone; A J Khan; R Osler
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

2.  Phytoplasma phylogenetics based on analysis of secA and 23S rRNA gene sequences for improved resolution of candidate species of 'Candidatus Phytoplasma'.

Authors:  Jennifer Hodgetts; Neil Boonham; Rick Mumford; Nigel Harrison; Matthew Dickinson
Journal:  Int J Syst Evol Microbiol       Date:  2008-08       Impact factor: 2.747

3.  Sequence and RFLP analysis of the elongation factor Tu gene used in differentiation and classification of phytoplasmas.

Authors:  Bernd Schneider; Karen S Gibb
Journal:  Microbiology (Reading)       Date:  1997-10       Impact factor: 2.777

4.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

  4 in total

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