Literature DB >> 30992274

Brain organoids: advances, applications and challenges.

Xuyu Qian1,2, Hongjun Song1,3,4,5, Guo-Li Ming6,3,4,7.   

Abstract

Brain organoids are self-assembled three-dimensional aggregates generated from pluripotent stem cells with cell types and cytoarchitectures that resemble the embryonic human brain. As such, they have emerged as novel model systems that can be used to investigate human brain development and disorders. Although brain organoids mimic many key features of early human brain development at molecular, cellular, structural and functional levels, some aspects of brain development, such as the formation of distinct cortical neuronal layers, gyrification, and the establishment of complex neuronal circuitry, are not fully recapitulated. Here, we summarize recent advances in the development of brain organoid methodologies and discuss their applications in disease modeling. In addition, we compare current organoid systems to the embryonic human brain, highlighting features that currently can and cannot be recapitulated, and discuss perspectives for advancing current brain organoid technologies to expand their applications.
© 2019. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Brain organoids; Neuroscience; Stem cell

Mesh:

Year:  2019        PMID: 30992274      PMCID: PMC6503989          DOI: 10.1242/dev.166074

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  134 in total

1.  Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture.

Authors:  Anca M Paşca; Steven A Sloan; Laura E Clarke; Yuan Tian; Christopher D Makinson; Nina Huber; Chul Hoon Kim; Jin-Young Park; Nancy A O'Rourke; Khoa D Nguyen; Stephen J Smith; John R Huguenard; Daniel H Geschwind; Ben A Barres; Sergiu P Paşca
Journal:  Nat Methods       Date:  2015-05-25       Impact factor: 28.547

2.  Genome engineering using the CRISPR-Cas9 system.

Authors:  F Ann Ran; Patrick D Hsu; Jason Wright; Vineeta Agarwala; David A Scott; Feng Zhang
Journal:  Nat Protoc       Date:  2013-10-24       Impact factor: 13.491

3.  Detection and sequencing of Zika virus from amniotic fluid of fetuses with microcephaly in Brazil: a case study.

Authors:  Guilherme Calvet; Renato S Aguiar; Adriana S O Melo; Simone A Sampaio; Ivano de Filippis; Allison Fabri; Eliane S M Araujo; Patricia C de Sequeira; Marcos C L de Mendonça; Louisi de Oliveira; Diogo A Tschoeke; Carlos G Schrago; Fabiano L Thompson; Patricia Brasil; Flavia B Dos Santos; Rita M R Nogueira; Amilcar Tanuri; Ana M B de Filippis
Journal:  Lancet Infect Dis       Date:  2016-02-18       Impact factor: 25.071

Review 4.  Evolution of the neocortex: a perspective from developmental biology.

Authors:  Pasko Rakic
Journal:  Nat Rev Neurosci       Date:  2009-10       Impact factor: 34.870

5.  Zika virus impairs growth in human neurospheres and brain organoids.

Authors:  Patricia P Garcez; Erick Correia Loiola; Rodrigo Madeiro da Costa; Luiza M Higa; Pablo Trindade; Rodrigo Delvecchio; Juliana Minardi Nascimento; Rodrigo Brindeiro; Amilcar Tanuri; Stevens K Rehen
Journal:  Science       Date:  2016-04-10       Impact factor: 47.728

6.  Reliability of human cortical organoid generation.

Authors:  Se-Jin Yoon; Lubayna S Elahi; Anca M Pașca; Rebecca M Marton; Aaron Gordon; Omer Revah; Yuki Miura; Elisabeth M Walczak; Gwendolyn M Holdgate; H Christina Fan; John R Huguenard; Daniel H Geschwind; Sergiu P Pașca
Journal:  Nat Methods       Date:  2018-12-20       Impact factor: 28.547

7.  Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.

Authors:  J Gray Camp; Farhath Badsha; Marta Florio; Sabina Kanton; Tobias Gerber; Michaela Wilsch-Bräuninger; Eric Lewitus; Alex Sykes; Wulf Hevers; Madeline Lancaster; Juergen A Knoblich; Robert Lachmann; Svante Pääbo; Wieland B Huttner; Barbara Treutlein
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-07       Impact factor: 11.205

Review 8.  How does Zika virus cause microcephaly?

Authors:  Zhexing Wen; Hongjun Song; Guo-Li Ming
Journal:  Genes Dev       Date:  2017-05-01       Impact factor: 11.361

9.  Human Brain Organoids on a Chip Reveal the Physics of Folding.

Authors:  Eyal Karzbrun; Aditya Kshirsagar; Sidney R Cohen; Jacob H Hanna; Orly Reiner
Journal:  Nat Phys       Date:  2018-02-19       Impact factor: 20.034

10.  2D and 3D Stem Cell Models of Primate Cortical Development Identify Species-Specific Differences in Progenitor Behavior Contributing to Brain Size.

Authors:  Tomoki Otani; Maria C Marchetto; Fred H Gage; Benjamin D Simons; Frederick J Livesey
Journal:  Cell Stem Cell       Date:  2016-03-31       Impact factor: 25.269

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  124 in total

1.  Modeling of human neurulation using bioengineered pluripotent stem cell culture.

Authors:  Xufeng Xue; Ryan P Wang; Jianping Fu
Journal:  Curr Opin Biomed Eng       Date:  2020-02-17

Review 2.  Engineering Human Brain Organoids: From Basic Research to Tissue Regeneration.

Authors:  Hye-Jin Jeong; Zuly Jimenez; Karakoz Mukhambetiyar; Minwook Seo; Jeong-Won Choi; Tae-Eun Park
Journal:  Tissue Eng Regen Med       Date:  2020-04-23       Impact factor: 4.169

3.  An American Physiological Society cross-journal Call for Papers on "Deconstructing Organs: Single-Cell Analyses, Decellularized Organs, Organoids, and Organ-on-a-Chip Models".

Authors:  Josephine C Adams; P Darwin Bell; Sue C Bodine; Heddwen L Brooks; Nigel Bunnett; Bina Joe; Kara Hansell Keehan; Thomas R Kleyman; André Marette; Rory E Morty; Jan-Marino Ramírez; Morten B Thomsen; Bill J Yates; Irving H Zucker
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2020-07-01       Impact factor: 5.464

Review 4.  Immune cell regulation of glia during CNS injury and disease.

Authors:  Andrew D Greenhalgh; Sam David; F Chris Bennett
Journal:  Nat Rev Neurosci       Date:  2020-02-10       Impact factor: 34.870

Review 5.  Mechanobiology of cells and cell systems, such as organoids.

Authors:  Ece Bayir; Aylin Sendemir; Yannis F Missirlis
Journal:  Biophys Rev       Date:  2019-09-09

Review 6.  iPSC modeling of rare pediatric disorders.

Authors:  Bethany A Freel; Jordan N Sheets; Kevin R Francis
Journal:  J Neurosci Methods       Date:  2019-12-04       Impact factor: 2.390

7.  Comparative Transcriptomic Analysis of Cerebral Organoids and Cortical Neuron Cultures Derived from Human Induced Pluripotent Stem Cells.

Authors:  Annie Kathuria; Kara Lopez-Lengowski; Bradley Watmuff; Rakesh Karmacharya
Journal:  Stem Cells Dev       Date:  2020-09-22       Impact factor: 3.272

8.  Transcriptomic Landscape and Functional Characterization of Induced Pluripotent Stem Cell-Derived Cerebral Organoids in Schizophrenia.

Authors:  Annie Kathuria; Kara Lopez-Lengowski; Smita S Jagtap; Donna McPhie; Roy H Perlis; Bruce M Cohen; Rakesh Karmacharya
Journal:  JAMA Psychiatry       Date:  2020-07-01       Impact factor: 21.596

Review 9.  CNS organoids: an innovative tool for neurological disease modeling and drug neurotoxicity screening.

Authors:  Tanya Chhibber; Sounak Bagchi; Behnaz Lahooti; Angela Verma; Abraham Al-Ahmad; Manash K Paul; Gurudutt Pendyala; Rahul Dev Jayant
Journal:  Drug Discov Today       Date:  2019-11-26       Impact factor: 7.851

10.  Sliced Human Cortical Organoids for Modeling Distinct Cortical Layer Formation.

Authors:  Xuyu Qian; Yijing Su; Christopher D Adam; Andre U Deutschmann; Sarshan R Pather; Ethan M Goldberg; Kenong Su; Shiying Li; Lu Lu; Fadi Jacob; Phuong T T Nguyen; Sooyoung Huh; Ahmet Hoke; Sarah E Swinford-Jackson; Zhexing Wen; Xiaosong Gu; R Christopher Pierce; Hao Wu; Lisa A Briand; H Isaac Chen; John A Wolf; Hongjun Song; Guo-Li Ming
Journal:  Cell Stem Cell       Date:  2020-03-05       Impact factor: 24.633

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