Literature DB >> 30989268

A micro-Raman and chemometric study of urinary tract infection-causing bacterial pathogens in mixed cultures.

Yogesha M1, Kiran Chawla2, Aseefhali Bankapur1, Mahendra Acharya1, Jacinta S D'Souza3, Santhosh Chidangil4.   

Abstract

Detection of urinary tract infection (UTI)-causing bacteria uses conventional time-consuming microbiological techniques. The current need is to use a fast and reliable method of bacterial identification. In order to unambiguously distinguish the UTI-causing five bacterial species used in the current study, micro-Raman spectra were obtained from a home-assembled micro-Raman system and analyzed by multivariate statistical techniques such as principal component analysis (PCA), partial least square-discriminate analysis (PLS-DA), and support vector machine (SVM). Also, the micro-Raman spectra recorded from samples containing two and three bacterial species were tested and validated against the aforementioned calibration models using PLS-DA and SVM. The prediction accuracies of up to 73 and 89% were achieved with PLS-DA and SVM, respectively. Taken together, the present study depicts the capturing of unique micro-Raman spectral features manifesting from the biochemical content of each bacterium. Also, micro-Raman spectroscopy combined with multivariate data analysis can therefore be a reliable and faster technique for the diagnosis of UTI-causing bacteria. Graphical Abstract.

Entities:  

Keywords:  Micro-Raman spectroscopy; Multivariate classification; PCA; PLS-DA; SVM; UTI-causing bacteria

Mesh:

Year:  2019        PMID: 30989268     DOI: 10.1007/s00216-019-01784-4

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  3 in total

1.  Phylogenetic analysis and antimicrobial susceptibility profile of uropathogens.

Authors:  Hanif Ullah; Kashif Bashir; Muhammad Idrees; Amin Ullah; Neelma Hassan; Sara Khan; Bilal Nasir; Tariq Nadeem; Hina Ahsan; Muhammad Islam Khan; Qurban Ali; Sher Muhammad; Muhammad Afzal
Journal:  PLoS One       Date:  2022-01-28       Impact factor: 3.240

2.  Development of a spectroscopic technique that enables the saliva based detection of COVID-19 at safe distances.

Authors:  Jijo Lukose; Ajayakumar Barik; V K Unnikrishnan; Sajan D George; V B Kartha; Santhosh Chidangil
Journal:  Results Chem       Date:  2021-10-07

Review 3.  Raman Spectroscopy-A Novel Method for Identification and Characterization of Microbes on a Single-Cell Level in Clinical Settings.

Authors:  Katarina Rebrosova; Ota Samek; Martin Kizovsky; Silvie Bernatova; Veronika Hola; Filip Ruzicka
Journal:  Front Cell Infect Microbiol       Date:  2022-04-22       Impact factor: 6.073

  3 in total

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