Literature DB >> 30986455

The critical roles of exposed surface residues for the thermostability and halotolerance of a novel GH11 xylanase from the metagenomic library of a saline-alkaline soil.

Zhongyuan Li1, Xiumei Li2, Tianhui Liu1, Shiheng Chen1, Huihui Liu1, Hui Wang1, Kun Li1, Yajian Song1, Xuegang Luo1, Junqi Zhao3, Tongcun Zhang4.   

Abstract

Thermostable and halotolerant GH11 xylanases are highly desirable in various industrial applications but they were rarely characterized. In this study, we firstly revealed the genetic diversity of GH11 xylanases from the metagenomic DNA of a saline-alkaline soil by constructing a gene fragment library. Twelve distinct xylanase fragment sequences were identified, which shared 62-96% identity to known GH11 xylanases. Among them, Xyn22 with the highest relative abundance was cloned and found to exhibit excellent halotolerance. Xyn22 retained 80 and 58% relative activity in the presence of 3 and 5 M NaCl, respectively, and had no loss of activity after incubation in 3 M NaCl at 37 °C for 1 h. Additionally, the acidic amino acid residues E137 and E139 on the protein's surface were revealed to cooperatively play important roles in its excellent halotolerance and halostabilty. Furthermore, the thermostability of Xyn22 was significantly improved without compromising halotolerance by introducing an aromatic interaction between Y48 and F53. In conclusion, this study not only provides a thermostable and halotolerant GH11 xylanase, but also reveals the key roles of surface-exposed amino acids in its thermostability and halotolerance, which could be used for further molecular modification of other xylanases and similar enzymes.
Copyright © 2019. Published by Elsevier B.V.

Entities:  

Keywords:  Acidic surface residues; Halotolerance; Site-directed mutation; Thermostability; Xylanase

Year:  2019        PMID: 30986455     DOI: 10.1016/j.ijbiomac.2019.04.090

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

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Authors:  Xiaolong Cen; Rui Zhang; Limei He; Xianghua Tang; Qian Wu; Junpei Zhou; Zunxi Huang
Journal:  Front Microbiol       Date:  2022-06-23       Impact factor: 6.064

2.  Characterization of a new bifunctional endo-1,4-β-xylanase/esterase found in the rumen metagenome.

Authors:  Gabriella Cavazzini Pavarina; Eliana Gertrudes de Macedo Lemos; Natália Sarmanho Monteiro Lima; João Martins Pizauro
Journal:  Sci Rep       Date:  2021-05-17       Impact factor: 4.379

3.  Invitro bioprocessing of corn as poultry feed additive by the influence of carbohydrate hydrolyzing metagenome derived enzyme cocktail.

Authors:  Seyed Hossein Mousavi; Seyedeh Fatemeh Sadeghian Motahar; Maryam Salami; Kaveh Kavousi; Atefeh Sheykh Abdollahzadeh Mamaghani; Shohreh Ariaeenejad; Ghasem Hosseini Salekdeh
Journal:  Sci Rep       Date:  2022-01-10       Impact factor: 4.379

Review 4.  The Methods of Digging for "Gold" within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools.

Authors:  Jakub Lach; Paulina Jęcz; Dominik Strapagiel; Agnieszka Matera-Witkiewicz; Paweł Stączek
Journal:  Genes (Basel)       Date:  2021-11-01       Impact factor: 4.096

  4 in total

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