Literature DB >> 30978594

The ATP-powered gymnastics of TRiC/CCT: an asymmetric protein folding machine with a symmetric origin story.

Daniel Gestaut1, Antonio Limatola1, Lukasz Joachimiak1, Judith Frydman2.   

Abstract

The eukaryotic chaperonin TRiC/CCT is a large hetero-oligomeric complex that plays an essential role assisting cellular protein folding and suppressing protein aggregation. It consists of two rings, and each composed of eight different subunits; non-native polypeptides bind and fold in an ATP-dependent manner within their central chamber. Here, we review recent advances in our understanding of TRiC structure and mechanism enabled by application of hybrid structural methods including the integration of cryo-electron microscopy with distance constraints from crosslinking mass spectrometry. These new insights are revealing how the different TRiC/CCT subunits create asymmetry in its ATP-driven conformational cycle and its interaction with non-native polypeptides, which ultimately underlie its unique ability to fold proteins that cannot be folded by other chaperones.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 30978594      PMCID: PMC6776438          DOI: 10.1016/j.sbi.2019.03.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  45 in total

Review 1.  The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.

Authors:  Manajit Hayer-Hartl; Andreas Bracher; F Ulrich Hartl
Journal:  Trends Biochem Sci       Date:  2015-09-25       Impact factor: 13.807

2.  A human interactome in three quantitative dimensions organized by stoichiometries and abundances.

Authors:  Marco Y Hein; Nina C Hubner; Ina Poser; Jürgen Cox; Nagarjuna Nagaraj; Yusuke Toyoda; Igor A Gak; Ina Weisswange; Jörg Mansfeld; Frank Buchholz; Anthony A Hyman; Matthias Mann
Journal:  Cell       Date:  2015-10-22       Impact factor: 41.582

3.  Sequential ATP-induced allosteric transitions of the cytoplasmic chaperonin containing TCP-1 revealed by EM analysis.

Authors:  Dalia Rivenzon-Segal; Sharon G Wolf; Liat Shimon; Keith R Willison; Amnon Horovitz
Journal:  Nat Struct Mol Biol       Date:  2005-02-06       Impact factor: 15.369

4.  The crystal structure of yeast CCT reveals intrinsic asymmetry of eukaryotic cytosolic chaperonins.

Authors:  Carien Dekker; S Mark Roe; Elizabeth A McCormack; Fabienne Beuron; Laurence H Pearl; Keith R Willison
Journal:  EMBO J       Date:  2011-06-24       Impact factor: 11.598

5.  4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.

Authors:  Yao Cong; Matthew L Baker; Joanita Jakana; David Woolford; Erik J Miller; Stefanie Reissmann; Ramya N Kumar; Alyssa M Redding-Johanson; Tanveer S Batth; Aindrila Mukhopadhyay; Steven J Ludtke; Judith Frydman; Wah Chiu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-01       Impact factor: 11.205

6.  Role of CCT chaperonin in the disassembly of mitotic checkpoint complexes.

Authors:  Sharon Kaisari; Danielle Sitry-Shevah; Shirly Miniowitz-Shemtov; Adar Teichner; Avram Hershko
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

7.  Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM.

Authors:  Yunxiang Zang; Mingliang Jin; Huping Wang; Zhicheng Cui; Liangliang Kong; Caixuan Liu; Yao Cong
Journal:  Nat Struct Mol Biol       Date:  2016-10-24       Impact factor: 15.369

8.  Sensing cooperativity in ATP hydrolysis for single multisubunit enzymes in solution.

Authors:  Yan Jiang; Nicholai R Douglas; Nicholas R Conley; Erik J Miller; Judith Frydman; W E Moerner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-06       Impact factor: 11.205

9.  An information theoretic framework reveals a tunable allosteric network in group II chaperonins.

Authors:  Tom Lopez; Kevin Dalton; Anthony Tomlinson; Vijay Pande; Judith Frydman
Journal:  Nat Struct Mol Biol       Date:  2017-07-24       Impact factor: 15.369

10.  Defining the TRiC/CCT interactome links chaperonin function to stabilization of newly made proteins with complex topologies.

Authors:  Alice Y Yam; Yu Xia; Hen-Tzu Jill Lin; Alma Burlingame; Mark Gerstein; Judith Frydman
Journal:  Nat Struct Mol Biol       Date:  2008-11-16       Impact factor: 15.369

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  18 in total

1.  Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.

Authors:  Jonathan J Knowlton; Daniel Gestaut; Boxue Ma; Gwen Taylor; Alpay Burak Seven; Alexander Leitner; Gregory J Wilson; Sreejesh Shanker; Nathan A Yates; B V Venkataram Prasad; Ruedi Aebersold; Wah Chiu; Judith Frydman; Terence S Dermody
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

2.  Human Papillomavirus infection requires the CCT Chaperonin Complex.

Authors:  Marina Bugnon Valdano; Paola Massimi; Justyna Broniarczyk; David Pim; Michael Myers; Daniela Gardiol; Lawrence Banks
Journal:  J Virol       Date:  2021-03-17       Impact factor: 5.103

Review 3.  Challenging Proteostasis: Role of the Chaperone Network to Control Aggregation-Prone Proteins in Human Disease.

Authors:  Tessa Sinnige; Anan Yu; Richard I Morimoto
Journal:  Adv Exp Med Biol       Date:  2020       Impact factor: 2.622

Review 4.  Intrinsic dynamics is evolutionarily optimized to enable allosteric behavior.

Authors:  Yan Zhang; Pemra Doruker; Burak Kaynak; She Zhang; James Krieger; Hongchun Li; Ivet Bahar
Journal:  Curr Opin Struct Biol       Date:  2019-11-27       Impact factor: 6.809

5.  Upregulated YB-1 protein promotes glioblastoma growth through a YB-1/CCT4/mLST8/mTOR pathway.

Authors:  Jin-Zhu Wang; Hong Zhu; Pu You; Hui Liu; Wei-Kang Wang; Xiaojuan Fan; Yun Yang; Keren Xu; Yingfeng Zhu; Qunyi Li; Ping Wu; Chao Peng; Catherine Cl Wong; Kaicheng Li; Yufeng Shi; Nu Zhang; Xiuxing Wang; Rong Zeng; Ying Huang; Liusong Yang; Zefeng Wang; Jingyi Hui
Journal:  J Clin Invest       Date:  2022-04-15       Impact factor: 19.456

6.  Differentiation Drives Widespread Rewiring of the Neural Stem Cell Chaperone Network.

Authors:  Willianne I M Vonk; T Kelly Rainbolt; Patrick T Dolan; Ashley E Webb; Anne Brunet; Judith Frydman
Journal:  Mol Cell       Date:  2020-04-07       Impact factor: 17.970

7.  Evolution of the Free Energy Landscapes of n-Alkane Guests Bound within Supramolecular Complexes.

Authors:  Busayo D Alagbe; Bruce C Gibb; Henry S Ashbaugh
Journal:  J Phys Chem B       Date:  2021-06-25       Impact factor: 2.991

8.  TRiC/CCT Complex, a Binding Partner of NS1 Protein, Supports the Replication of Zika Virus in Both Mammalians and Mosquitoes.

Authors:  Yuchen Wang; Ryuta Uraki; Jesse Hwang; Erol Fikrig
Journal:  Viruses       Date:  2020-05-08       Impact factor: 5.048

9.  Investigating Chaperonin-Containing TCP-1 subunit 2 as an essential component of the chaperonin complex for tumorigenesis.

Authors:  Anne E Showalter; Ana C Martini; Daniel Nierenberg; Kristen Hosang; Naima Ahmed Fahmi; Priya Gopalan; Amr S Khaled; Wei Zhang; Annette R Khaled
Journal:  Sci Rep       Date:  2020-01-21       Impact factor: 4.379

10.  Native mass spectrometry analyses of chaperonin complex TRiC/CCT reveal subunit N-terminal processing and re-association patterns.

Authors:  Miranda P Collier; Karen Betancourt Moreira; Kathy H Li; Yu-Chan Chen; Daniel Itzhak; Rahul Samant; Alexander Leitner; Alma Burlingame; Judith Frydman
Journal:  Sci Rep       Date:  2021-06-22       Impact factor: 4.379

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