| Literature DB >> 30968730 |
Fedor S Sharko1, Eugenia S Boulygina2, Sergey M Rastorguev2, Svetlana V Tsygankova2, Pavel S Tomkovich3, Artem V Nedoluzhko2,4.
Abstract
The high-capacity DNA analysis of museum samples opens new opportunities, associated with the investigation of extinct species evolution. Here, the complete mitochondrial genome of the presumably extinct bird species, the slender-billed curlew Numenius tenuirostris (Charadriiformes: Scolopacidae) is presented. Our results showed that mitochondrial DNA (mtDNA) is 16,705 base pairs (bp) in length and contain 13 protein-coding genes, two rRNA genes, and 22 tRNA genes. The overall base composition of the genome is 30.8% - A, 29.8% - C, 25.4% - T, 14.0% - G, and without a significant GC bias of 43.7%. Phylogenetic analyses based on the cytochrome B (cytB) gene and the whole mtDNA sequences revealed that N. tenuirostris had a close genetic relationship to Eurasian curlew (N. arquata), Far Eastern curlew (N. madagascariensis), and long-billed curlew - N. americanus. Besides, it reveals that Numenius genus is genetically distant from other Scolopacidae taxons. Together, these results provide a clear genetic perspective into the speciation process among the curlew genus members and points to a clear taxonomic position of N. tenuirostris.Entities:
Keywords: Extinction; Scolopacidae; historical DNA; mitochondrial genome; museum specimen
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Year: 2019 PMID: 30968730 DOI: 10.1080/24701394.2019.1597862
Source DB: PubMed Journal: Mitochondrial DNA A DNA Mapp Seq Anal ISSN: 2470-1394 Impact factor: 1.514