Literature DB >> 30967473

A basic protein, N25, from a mollusk modifies calcium carbonate morphology and shell biomineralization.

Dong Yang1, Yi Yan1, Xue Yang1, Jun Liu1, Guilan Zheng1, Liping Xie2, Rongqing Zhang3,4.   

Abstract

Biomineralization is a widespread biological process in the formation of shells, teeth, or bones. Matrix proteins in biominerals have been widely investigated for their roles in directing biomineralization processes such as crystal morphologies, polymorphs, and orientations. Here, we characterized a basic matrix protein, named mantle protein N25 (N25), identified previously in the Akoya pearl oyster (Pinctada fucata). Unlike some known acidic matrix proteins containing Asp or Glu as possible Ca2+-binding residues, we found that N25 is rich in Pro (12.4%), Ser (12.8%), and Lys (8.8%), suggesting it may perform a different function. We used the recombinant protein purified by refolding from inclusion bodies in a Ca(HCO3)2 supersaturation system and found that it specifically affects calcite morphologies. An X-ray powder diffraction (XRD) assay revealed that N25 could help delay the transformation of vaterites (a metastable calcium carbonate polymorph) to calcite. We also used fluorescence super-resolution imaging to map the distribution of N25 in CaCO3 crystals and transfected a recombinant N25-EGFP vector into HEK-293T cells to mimic the native process in which N25 is secreted by mantle epithelial cells and integrated into mineral structures. Our observations suggest N25 specifically affects crystal morphologies and provide evidence that basic proteins lacking acidic groups can also direct biomineralization. We propose that the attachment of N25 to specific sites on CaCO3 crystals may inhibit some crystal polymorphs or morphological transformation.
© 2019 Yang et al.

Entities:  

Keywords:  N25; attachment energy; biomineralization; calcite binding protein; extracellular matrix protein; morphological simulation; protein folding; protein secretion; vesicles

Mesh:

Substances:

Year:  2019        PMID: 30967473      PMCID: PMC6544838          DOI: 10.1074/jbc.RA118.007338

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

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Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

2.  Mollusk shell formation: a source of new concepts for understanding biomineralization processes.

Authors:  Lia Addadi; Derk Joester; Fabio Nudelman; Steve Weiner
Journal:  Chemistry       Date:  2006-01-23       Impact factor: 5.236

Review 3.  Molluscan shell proteins: primary structure, origin, and evolution.

Authors:  Frédéric Marin; Gilles Luquet; Benjamin Marie; Davorin Medakovic
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4.  Predicting Secretory Proteins with SignalP.

Authors:  Henrik Nielsen
Journal:  Methods Mol Biol       Date:  2017

5.  Structural characterization of amorphous calcium carbonate-binding protein: an insight into the mechanism of amorphous calcium carbonate formation.

Authors:  Jingtan Su; Xiao Liang; Qiang Zhou; Guiyou Zhang; Hongzhong Wang; Liping Xie; Rongqing Zhang
Journal:  Biochem J       Date:  2013-07-15       Impact factor: 3.857

6.  Adsorption of alpha-helical antifreeze peptides on specific ice crystal surface planes.

Authors:  C A Knight; C C Cheng; A L DeVries
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

7.  Novel basic protein, PfN23, functions as key macromolecule during nacre formation.

Authors:  Dong Fang; Cong Pan; Huijuan Lin; Ya Lin; Guiyou Zhang; Hongzhong Wang; Maoxian He; Liping Xie; Rongqing Zhang
Journal:  J Biol Chem       Date:  2012-03-13       Impact factor: 5.157

8.  Structure and expression of an unusually acidic matrix protein of pearl oyster shells.

Authors:  Daiki Tsukamoto; Isao Sarashina; Kazuyoshi Endo
Journal:  Biochem Biophys Res Commun       Date:  2004-08-06       Impact factor: 3.575

9.  In vitro regulation of CaCO(3) crystal polymorphism by the highly acidic molluscan shell protein Aspein.

Authors:  Takeshi Takeuchi; Isao Sarashina; Minoru Iijima; Kazuyoshi Endo
Journal:  FEBS Lett       Date:  2008-01-31       Impact factor: 4.124

10.  In-depth proteomic analysis of shell matrix proteins of Pinctada fucata.

Authors:  Chuang Liu; Shiguo Li; Jingjing Kong; Yangjia Liu; Tianpeng Wang; Liping Xie; Rongqing Zhang
Journal:  Sci Rep       Date:  2015-11-26       Impact factor: 4.379

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  6 in total

1.  Shell Matrix Protein N38 of Pinctada fucata, Inducing Vaterite Formation, Extends the DING Protein to the Mollusca World.

Authors:  Xin Zhang; Zehui Yin; Zhuojun Ma; Jian Liang; Zhen Zhang; Liping Yao; Xia Chen; Xiaojun Liu; Rongqing Zhang
Journal:  Mar Biotechnol (NY)       Date:  2022-05-02       Impact factor: 3.619

2.  DCSr-NL: A Novel Method to Semiquantitatively Probe the Growth Rate of Nacre.

Authors:  Li Yi; Bing Zou; Liping Xie; Rongqing Zhang
Journal:  ACS Omega       Date:  2022-06-30

3.  Enhanced sequestration of carbon dioxide into calcium carbonate using pressure and a carbonic anhydrase from alkaliphilic Coleofasciculus chthonoplastes.

Authors:  Jonas Heuer; Yasemin Kraus; Marijan Vučak; An-Ping Zeng
Journal:  Eng Life Sci       Date:  2021-07-26       Impact factor: 2.678

4.  Ps19, a novel chitin binding protein from Pteria sterna capable to mineralize aragonite plates in vitro.

Authors:  Raquel G Arroyo-Loranca; Norma Y Hernandez-Saavedra; Luis Hernandez-Adame; Crisalejandra Rivera-Perez
Journal:  PLoS One       Date:  2020-03-19       Impact factor: 3.240

5.  A shell matrix protein of Pinctada mazatlanica produces nacre platelets in vitro.

Authors:  Crisalejandra Rivera-Perez; Iliana Alejandra Flores-Sánchez; Josafat Jehu Ojeda Ramírez de Areyano; Delia Irene Rojas Posadas; Norma Y Hernández-Saavedra
Journal:  Sci Rep       Date:  2020-11-19       Impact factor: 4.379

6.  Recombinant transgelin-like protein 1 from Mytilus shell induces formation of CaCO3 polymorphic crystals in vitro.

Authors:  Yuting Jiang; Qi Sun; Meihua Fan; Jianyu He; Xiaolin Zhang; Huanzhi Xu; Zhi Liao
Journal:  FEBS Open Bio       Date:  2020-09-21       Impact factor: 2.792

  6 in total

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