Literature DB >> 30967184

Uncertainty estimation and misclassification probability for classification models based on discriminant analysis and support vector machines.

Camilo L M Morais1, Kássio M G Lima2, Francis L Martin3.   

Abstract

Uncertainty estimation provides a quantitative value of the predictive performance of a classification model based on its misclassification probability. Low misclassification probabilities are associated with a low degree of uncertainty, indicating high trustworthiness; while high misclassification probabilities are associated with a high degree of uncertainty, indicating a high susceptibility to generate incorrect classification. Herein, misclassification probability estimations based on uncertainty estimation by bootstrap were developed for classification models using discriminant analysis [linear discriminant analysis (LDA) and quadratic discriminant analysis (QDA)] and support vector machines (SVM). Principal component analysis (PCA) was used as variable reduction technique prior classification. Four spectral datasets were tested (1 simulated and 3 real applications) for binary and ternary classifications. Models with lower misclassification probabilities were more stable when the spectra were perturbed with white Gaussian noise, indicating better robustness. Thus, misclassification probability can be used as an additional figure of merit to assess model robustness, providing a reliable metric to evaluate the predictive performance of a classifier.
Copyright © 2018 Elsevier B.V. All rights reserved.

Keywords:  Classification; Discriminant analysis; Figures of merit; Misclassification; Support vector machines; Uncertainty

Year:  2018        PMID: 30967184     DOI: 10.1016/j.aca.2018.09.022

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  6 in total

1.  Spectrochemical differentiation in gestational diabetes mellitus based on attenuated total reflection Fourier-transform infrared (ATR-FTIR) spectroscopy and multivariate analysis.

Authors:  Emanuelly Bernardes-Oliveira; Daniel Lucas Dantas de Freitas; Camilo de Lelis Medeiros de Morais; Maria da Conceição de Mesquita Cornetta; Juliana Dantas de Araújo Santos Camargo; Kassio Michell Gomes de Lima; Janaina Cristiana de Oliveira Crispim
Journal:  Sci Rep       Date:  2020-11-06       Impact factor: 4.379

2.  Intelligent Evaluation of Stone Cell Content of Korla Fragrant Pears by Vis/NIR Reflection Spectroscopy.

Authors:  Tongzhao Wang; Yixiao Zhang; Yuanyuan Liu; Zhijuan Zhang; Tongbin Yan
Journal:  Foods       Date:  2022-08-09

3.  Spectrochemical analysis of liquid biopsy harnessed to multivariate analysis towards breast cancer screening.

Authors:  Daniel L D Freitas; Ingrid M Câmara; Priscila P Silva; Nathália R S Wanderley; Maria B C Alves; Camilo L M Morais; Francis L Martin; Tirzah B P Lajus; Kassio M G Lima
Journal:  Sci Rep       Date:  2020-07-30       Impact factor: 4.379

Review 4.  Machine Learning Applications for Mass Spectrometry-Based Metabolomics.

Authors:  Ulf W Liebal; An N T Phan; Malvika Sudhakar; Karthik Raman; Lars M Blank
Journal:  Metabolites       Date:  2020-06-13

5.  A quantitative uncertainty metric controls error in neural network-driven chemical discovery.

Authors:  Jon Paul Janet; Chenru Duan; Tzuhsiung Yang; Aditya Nandy; Heather J Kulik
Journal:  Chem Sci       Date:  2019-07-11       Impact factor: 9.825

6.  A comparative analysis of different biofluids towards ovarian cancer diagnosis using Raman microspectroscopy.

Authors:  Panagiotis Giamougiannis; Camilo L M Morais; Rita Grabowska; Katherine M Ashton; Nicholas J Wood; Pierre L Martin-Hirsch; Francis L Martin
Journal:  Anal Bioanal Chem       Date:  2020-11-26       Impact factor: 4.142

  6 in total

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