| Literature DB >> 30962825 |
Ahmed Kamil Awad1, Ali Ibrahim Ali Al-Ezzy2, Ghassan H Jameel1.
Abstract
AIM: The main objective is isolation and molecular characterisation of Malassezia spp. from pityriasis versicolor (PV) patients with special emphasis to risk factors in Diyala province, Iraq.Entities:
Keywords: Iraq; Malassezia spp; Molecular diagnosis; Pityriasis versicolor; Risk factors
Year: 2019 PMID: 30962825 PMCID: PMC6447351 DOI: 10.3889/oamjms.2019.128
Source DB: PubMed Journal: Open Access Maced J Med Sci ISSN: 1857-9655
Diagnosis of Malassezia spp. from human samples by morphological and physiological characteristics compared with conventional PCR using ITS3&ITS4 primers
| Characteristics | ||||
|---|---|---|---|---|
| Morphological characteristics | Colony morphology | Mat, dull, smooth, umbonate or slightly folded with convex elevation | Mat, convex, umbonate (sometimes) | Raised, folded, rough |
| Pigmentation | + | + | + | |
| Cell shape | Oval, cylindrical spherical | Oval | Spherical | |
| Physiological characteristics | Growth on SDA | |||
| Growth on SDA-castor oil | + | + | + | |
| Growth on Esculin agar | + | + | + | |
| Growth on mDA 32°C | + | + | + | |
| Growth on mDA 37°C | + | + | + | |
| Growth on mDA 41°C | + | + | + | |
| Catalase reaction | + | + | + | |
| Utilization of Tween 20 | + | + | + | |
| Utilization of Tween 40 | + | + | + | |
| Utilization of Tween 60 | + | + | + | |
| Utilization of Tween 80 | + | + | + | |
| Total number of | 16 (32%) | 4 (8%) | 7 (14%) | |
| Diagnosis by Conventional PCR using ITS3&ITS4 primers | 16 (32%) | 4 (8%) | 7 (14%) | |
Figure 1Agarose gel electrophoresis (2%) for 100 v/mAmp for 80 min of Malassezia spp. DNA products generated through ITS 3 (GCATCGATGAAGAACGCAGC), and ITS4 (TCCTCCGCTTATTGATATGC) primers, stained with Ethidium bromide; M: Molecular marker (100bp); lanes 1H, 2H, 3H: M. furfur (509bp); lanes H4: M. globosa (430bp); lanes H5: M. pachydermatis (483bp)
Age as a possible risk factor associated with Malassezia infection in human
| Descriptive statistic of patient’s age | |||||
|---|---|---|---|---|---|
| Minimum (years) | 15 | ||||
| Maximum (years) | 45 | ||||
| Mean ± Std. Deviation | 27.82 ± 8.39 | ||||
| Age group (years) | Malassezia | ||||
| Positive No. (%) | Total No. (%) of positive cases | Negative No. (%) | |||
| 15-22 | 7 (10%) | 1 (2%) | 3 (6%) | 11 (22%) | 5 (10%) |
| 23-30 | 4 (8%) | 2 (4%) | 3 (6%) | 9 (18%) | 7 (14%) |
| 31-38 | 3 (6%) | 1 (2%) | 0 (0%) | 4 (8%) | 8 (16%) |
| 39-42 | 1 (2%) | 0 (0%) | 0 (0%) | 1 (2%) | 2 (4%) |
| 43-46 | 1 (2%) | 0 (0%) | 1 (2%) | 2 (4%) | 1 (2%) |
| Total No. (%) | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) |
| χ2 | 27.523 | ||||
| P value | 0.154 | ||||
| R | -0.284 | ||||
| P value | 0.046 | ||||
Gender as a possible risk factor associated with Malassezia infection human
| Gender | Positive No.(%) | Total No. of positive cases | Negative No.(%) | ||||
|---|---|---|---|---|---|---|---|
| Male | 11 (22%) | 4 (8%) | 5 (10%) | 20 (40%) | 12 (24%) | ||
| Female | 5 (10%) | 0 (0%) | 2 (4%) | 7 (14%) | 11 (22%) | ||
| Total No. (%) | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) | ||
| χ2 | 3.970 | ||||||
| P value | 0.265 | ||||||
| R | 0.270 | ||||||
| P value | 0.05 | ||||||
| Risk Estimate | 95% Confidence Interval | ||||||
| Odds Ratio for gender (female / male) | Value | Lower | Upper | ||||
| 2.619 | 0.799 | 8.588 | |||||
Residence as a possible risk factor associated with Malassezia infection in human
| Residence | Positive NO.(%) | Negative No.(%) | ||||||
|---|---|---|---|---|---|---|---|---|
| Total No. of positive cases | ||||||||
| Rural | 5 (10%) | 2 (4%) | 3 (6%) | 10 (20%) | 9 (18%) | |||
| Urban | 11 (22%) | 2 (4%) | 4 (8%) | 17 (34%) | 14 (28%) | |||
| Total No.(%) | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) | |||
| χ2 | 0.023 | |||||||
| P value | 0.879 | |||||||
| R | -0.021 | |||||||
| P value | 0.882 | |||||||
| Risk Estimate | 95% Confidence Interval | |||||||
| Odds Ratio for Residence (rural / urban) | Value | Lower | Upper | |||||
| 1.093 | 0.348 | 3.435 | ||||||
Family economic status as a possible risk factor associated with Malassezia infection in human
| Economic Status | Positive No.(%) | Negative NO.(%) | |||||
|---|---|---|---|---|---|---|---|
| Total No. of positive cases | |||||||
| Middle | 6 (12%) | 0 (0%) | 3 (6%) | 9 (18%) | 4 (8%) | ||
| Good | 10 (20%) | 4 (8%) | 4 (8%) | 18 (36%) | 18 (36%) | ||
| Very good | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (2%) | ||
| Total No.(%) | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) | ||
| χ2 | 5.424 | ||||||
| P value | 0.491 | ||||||
| R | -0.086 | ||||||
| Risk Estimate | 95% Confidence Interval | ||||||
| Odds Ratio for economic status (middle/good) | Value | Lower | Upper | ||||
| 0.421 | 0.110 | 1.612 | |||||
Patients education status as possible risk factors associated with Malassezia infection in human
| Education level | Malassezia spp | ||||
|---|---|---|---|---|---|
| Illiterate | 0 (0%) | 2 (4%) | 0 (0%) | 2 (4%) | 4 (8%) |
| Primary | 8 (16%) | 0 (0%) | 3 (6%) | 11 (22%) | 12 (24%) |
| Secondary | 6 (12%) | 1 (2%) | 2 (4%) | 9 (18%) | 6 (12%) |
| Higher Education | 2 (4%) | 1 (2%) | 2 (4%) | 5 (10%) | 1 (2%) |
| Total | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) |
| χ2 | 3.785 | ||||
| P value | 0.286 | ||||
| R | 0.280 | ||||
| P value | 0.05 | ||||
Patient’s job as possible risk factors associated with Malassezia infection in human
| Job | Malassezia spp | ||||
|---|---|---|---|---|---|
| Free Work (Self-employer) | 2 (4%) | 0 (0%) | 2 (4%) | 4 (8%) | 3 (6%) |
| Farmer | 2 (4%) | 2 (4%) | 1 (2%) | 5 (10%) | 3 (6%) |
| Housewife | 2 (4%) | 0 (0%) | 1 (2%) | 3 (6%) | 7 (14%) |
| Military | 2 (4%) | 0 (0%) | 1 (2%) | 3 (6%) | 6 (12%) |
| Student | 8 (16%) | 1 (2%) | 1 (2%) | 10 (20%) | 3 (6%) |
| Education | 0 (0%) | 1 (2%) | 1 (2%) | 2 (4%) | 1 (2%) |
| Total | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) |
| χ2 | 18.981 | ||||
| P value | 0.215 | ||||
| R | 0.063 | ||||
| P value | 0.663 | ||||
Source of water as possible risk factors associated with Malassezia infection in human
| Source of water | Malassezia spp | ||||
|---|---|---|---|---|---|
| Tap Water | 1 (2%) | 1 (2%) | 3 (6%) | 5 (10%) | 2 (4%) |
| Filtrated | 14 (28%) | 3 (6%) | 4 (8%) | 21 (42%) | 21 (42%) |
| River Water | 1 (2%) | 0 (0%) | 0 (0%) | 1 (2%) | 0 (0%) |
| Total | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) |
| χ2 | 8.592 | ||||
| P value | 0.198 | ||||
| R | -0.219 | ||||
| P value | 0.126 | ||||
contact with animals as a possible risk factors associated with Malassezia infection in human
| contact with Animals | Malassezia spp | ||||
|---|---|---|---|---|---|
| No contact | 10 (20%) | 1 (2%) | 4 (8%) | 13 (26%) | |
| Bird | 3 (6%) | 1 (2%) | 1 (2%) | 6 (12%) | |
| Dogs | 1 (2%) | 1 (2%) | 0 (0%) | 2 (4%) | |
| Birds and dogs | 2 (4%) | 1 (2%) | 2 (4%) | 5 (10%) | 2 (4%) |
| Total | 16 (32%) | 4 (8%) | 7 (14%) | 27 (54%) | 23 (46%) |
| χ2 | 5.243 | ||||
| P value | 0.813 | ||||
| R | 0.185 | ||||
| P value | 0.199 | ||||