Literature DB >> 30959492

Deep-learning for seizure forecasting in canines with epilepsy.

Petr Nejedly1, Vaclav Kremen, Vladimir Sladky, Mona Nasseri, Hari Guragain, Petr Klimes, Jan Cimbalnik, Yogatheesan Varatharajah, Benjamin H Brinkmann, Gregory A Worrell.   

Abstract

OBJECTIVE: This paper introduces a fully automated, subject-specific deep-learning convolutional neural network (CNN) system for forecasting seizures using ambulatory intracranial EEG (iEEG). The system was tested on a hand-held device (Mayo Epilepsy Assist Device) in a pseudo-prospective mode using iEEG from four canines with naturally occurring epilepsy. APPROACH: The system was trained and tested on 75 seizures collected over 1608 d utilizing a genetic algorithm to optimize forecasting hyper-parameters (prediction horizon (PH), median filter window length, and probability threshold) for each subject-specific seizure forecasting model. The trained CNN models were deployed on a hand-held tablet computer and tested on testing iEEG datasets from four canines. The results from the iEEG testing datasets were compared with Monte Carlo simulations using a Poisson random predictor with equal time in warning to evaluate seizure forecasting performance. MAIN
RESULTS: The results show the CNN models forecasted seizures at rates significantly above chance in all four dogs (p   <  0.01, with mean 0.79 sensitivity and 18% time in warning). The deep learning method presented here surpassed the performance of previously reported methods using computationally expensive features with standard machine learning methods like logistic regression and support vector machine classifiers. SIGNIFICANCE: Our findings principally support the feasibility of deploying trained CNN models on a hand-held computational device (Mayo Epilepsy Assist Device) that analyzes streaming iEEG data for real-time seizure forecasting.

Entities:  

Mesh:

Year:  2019        PMID: 30959492     DOI: 10.1088/1741-2552/ab172d

Source DB:  PubMed          Journal:  J Neural Eng        ISSN: 1741-2552            Impact factor:   5.379


  11 in total

Review 1.  Dogs as a Natural Animal Model of Epilepsy.

Authors:  Wolfgang Löscher
Journal:  Front Vet Sci       Date:  2022-06-22

2.  Distributed brain co-processor for tracking spikes, seizures and behaviour during electrical brain stimulation.

Authors:  Vladimir Sladky; Petr Nejedly; Filip Mivalt; Benjamin H Brinkmann; Inyong Kim; Erik K St Louis; Nicholas M Gregg; Brian N Lundstrom; Chelsea M Crowe; Tal Pal Attia; Daniel Crepeau; Irena Balzekas; Victoria S Marks; Lydia P Wheeler; Jan Cimbalnik; Mark Cook; Radek Janca; Beverly K Sturges; Kent Leyde; Kai J Miller; Jamie J Van Gompel; Timothy Denison; Gregory A Worrell; Vaclav Kremen
Journal:  Brain Commun       Date:  2022-05-06

3.  Invasive Electrophysiology for Circuit Discovery and Study of Comorbid Psychiatric Disorders in Patients With Epilepsy: Challenges, Opportunities, and Novel Technologies.

Authors:  Irena Balzekas; Vladimir Sladky; Petr Nejedly; Benjamin H Brinkmann; Daniel Crepeau; Filip Mivalt; Nicholas M Gregg; Tal Pal Attia; Victoria S Marks; Lydia Wheeler; Tori E Riccelli; Jeffrey P Staab; Brian Nils Lundstrom; Kai J Miller; Jamie Van Gompel; Vaclav Kremen; Paul E Croarkin; Gregory A Worrell
Journal:  Front Hum Neurosci       Date:  2021-07-26       Impact factor: 3.473

4.  Big data analysis and artificial intelligence in epilepsy - common data model analysis and machine learning-based seizure detection and forecasting.

Authors:  Yoon Gi Chung; Yonghoon Jeon; Sooyoung Yoo; Hunmin Kim; Hee Hwang
Journal:  Clin Exp Pediatr       Date:  2021-11-26

5.  Ambulatory seizure forecasting with a wrist-worn device using long-short term memory deep learning.

Authors:  Mona Nasseri; Tal Pal Attia; Boney Joseph; Nicholas M Gregg; Ewan S Nurse; Pedro F Viana; Gregory Worrell; Matthias Dümpelmann; Mark P Richardson; Dean R Freestone; Benjamin H Brinkmann
Journal:  Sci Rep       Date:  2021-11-09       Impact factor: 4.379

6.  Epilepsy Personal Assistant Device-A Mobile Platform for Brain State, Dense Behavioral and Physiology Tracking and Controlling Adaptive Stimulation.

Authors:  Tal Pal Attia; Daniel Crepeau; Vaclav Kremen; Mona Nasseri; Hari Guragain; Steven W Steele; Vladimir Sladky; Petr Nejedly; Filip Mivalt; Jeffrey A Herron; Matt Stead; Timothy Denison; Gregory A Worrell; Benjamin H Brinkmann
Journal:  Front Neurol       Date:  2021-07-29       Impact factor: 4.003

7.  Epileptic seizure prediction using successive variational mode decomposition and transformers deep learning network.

Authors:  Xiao Wu; Tinglin Zhang; Limei Zhang; Lishan Qiao
Journal:  Front Neurosci       Date:  2022-09-26       Impact factor: 5.152

Review 8.  Epileptic Seizures Detection Using Deep Learning Techniques: A Review.

Authors:  Afshin Shoeibi; Marjane Khodatars; Navid Ghassemi; Mahboobeh Jafari; Parisa Moridian; Roohallah Alizadehsani; Maryam Panahiazar; Fahime Khozeimeh; Assef Zare; Hossein Hosseini-Nejad; Abbas Khosravi; Amir F Atiya; Diba Aminshahidi; Sadiq Hussain; Modjtaba Rouhani; Saeid Nahavandi; Udyavara Rajendra Acharya
Journal:  Int J Environ Res Public Health       Date:  2021-05-27       Impact factor: 3.390

Review 9.  Seizure Diaries and Forecasting With Wearables: Epilepsy Monitoring Outside the Clinic.

Authors:  Benjamin H Brinkmann; Philippa J Karoly; Ewan S Nurse; Sonya B Dumanis; Mona Nasseri; Pedro F Viana; Andreas Schulze-Bonhage; Dean R Freestone; Greg Worrell; Mark P Richardson; Mark J Cook
Journal:  Front Neurol       Date:  2021-07-13       Impact factor: 4.003

10.  Online Prediction of Lead Seizures from iEEG Data.

Authors:  Hsiang-Han Chen; Han-Tai Shiao; Vladimir Cherkassky
Journal:  Brain Sci       Date:  2021-11-24
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