OBJECTIVE: This paper introduces a fully automated, subject-specific deep-learning convolutional neural network (CNN) system for forecasting seizures using ambulatory intracranial EEG (iEEG). The system was tested on a hand-held device (Mayo Epilepsy Assist Device) in a pseudo-prospective mode using iEEG from four canines with naturally occurring epilepsy. APPROACH: The system was trained and tested on 75 seizures collected over 1608 d utilizing a genetic algorithm to optimize forecasting hyper-parameters (prediction horizon (PH), median filter window length, and probability threshold) for each subject-specific seizure forecasting model. The trained CNN models were deployed on a hand-held tablet computer and tested on testing iEEG datasets from four canines. The results from the iEEG testing datasets were compared with Monte Carlo simulations using a Poisson random predictor with equal time in warning to evaluate seizure forecasting performance. MAIN RESULTS: The results show the CNN models forecasted seizures at rates significantly above chance in all four dogs (p < 0.01, with mean 0.79 sensitivity and 18% time in warning). The deep learning method presented here surpassed the performance of previously reported methods using computationally expensive features with standard machine learning methods like logistic regression and support vector machine classifiers. SIGNIFICANCE: Our findings principally support the feasibility of deploying trained CNN models on a hand-held computational device (Mayo Epilepsy Assist Device) that analyzes streaming iEEG data for real-time seizure forecasting.
OBJECTIVE: This paper introduces a fully automated, subject-specific deep-learning convolutional neural network (CNN) system for forecasting seizures using ambulatory intracranial EEG (iEEG). The system was tested on a hand-held device (MayoEpilepsy Assist Device) in a pseudo-prospective mode using iEEG from four canines with naturally occurring epilepsy. APPROACH: The system was trained and tested on 75 seizures collected over 1608 d utilizing a genetic algorithm to optimize forecasting hyper-parameters (prediction horizon (PH), median filter window length, and probability threshold) for each subject-specific seizure forecasting model. The trained CNN models were deployed on a hand-held tablet computer and tested on testing iEEG datasets from four canines. The results from the iEEG testing datasets were compared with Monte Carlo simulations using a Poisson random predictor with equal time in warning to evaluate seizure forecasting performance. MAIN RESULTS: The results show the CNN models forecasted seizures at rates significantly above chance in all four dogs (p < 0.01, with mean 0.79 sensitivity and 18% time in warning). The deep learning method presented here surpassed the performance of previously reported methods using computationally expensive features with standard machine learning methods like logistic regression and support vector machine classifiers. SIGNIFICANCE: Our findings principally support the feasibility of deploying trained CNN models on a hand-held computational device (MayoEpilepsy Assist Device) that analyzes streaming iEEG data for real-time seizure forecasting.
Authors: Vladimir Sladky; Petr Nejedly; Filip Mivalt; Benjamin H Brinkmann; Inyong Kim; Erik K St Louis; Nicholas M Gregg; Brian N Lundstrom; Chelsea M Crowe; Tal Pal Attia; Daniel Crepeau; Irena Balzekas; Victoria S Marks; Lydia P Wheeler; Jan Cimbalnik; Mark Cook; Radek Janca; Beverly K Sturges; Kent Leyde; Kai J Miller; Jamie J Van Gompel; Timothy Denison; Gregory A Worrell; Vaclav Kremen Journal: Brain Commun Date: 2022-05-06
Authors: Irena Balzekas; Vladimir Sladky; Petr Nejedly; Benjamin H Brinkmann; Daniel Crepeau; Filip Mivalt; Nicholas M Gregg; Tal Pal Attia; Victoria S Marks; Lydia Wheeler; Tori E Riccelli; Jeffrey P Staab; Brian Nils Lundstrom; Kai J Miller; Jamie Van Gompel; Vaclav Kremen; Paul E Croarkin; Gregory A Worrell Journal: Front Hum Neurosci Date: 2021-07-26 Impact factor: 3.473
Authors: Mona Nasseri; Tal Pal Attia; Boney Joseph; Nicholas M Gregg; Ewan S Nurse; Pedro F Viana; Gregory Worrell; Matthias Dümpelmann; Mark P Richardson; Dean R Freestone; Benjamin H Brinkmann Journal: Sci Rep Date: 2021-11-09 Impact factor: 4.379
Authors: Tal Pal Attia; Daniel Crepeau; Vaclav Kremen; Mona Nasseri; Hari Guragain; Steven W Steele; Vladimir Sladky; Petr Nejedly; Filip Mivalt; Jeffrey A Herron; Matt Stead; Timothy Denison; Gregory A Worrell; Benjamin H Brinkmann Journal: Front Neurol Date: 2021-07-29 Impact factor: 4.003
Authors: Benjamin H Brinkmann; Philippa J Karoly; Ewan S Nurse; Sonya B Dumanis; Mona Nasseri; Pedro F Viana; Andreas Schulze-Bonhage; Dean R Freestone; Greg Worrell; Mark P Richardson; Mark J Cook Journal: Front Neurol Date: 2021-07-13 Impact factor: 4.003