Literature DB >> 30956008

The Long Non-Coding RNA lep-5 Promotes the Juvenile-to-Adult Transition by Destabilizing LIN-28.

Karin C Kiontke1, R Antonio Herrera2, Edward Vuong3, Jintao Luo3, Erich M Schwarz4, David H A Fitch5, Douglas S Portman6.   

Abstract

Biological roles for most long non-coding RNAs (lncRNAs) remain mysterious. Here, using forward genetics, we identify lep-5, a lncRNA acting in the C. elegans heterochronic (developmental timing) pathway. Loss of lep-5 delays hypodermal maturation and male tail tip morphogenesis (TTM), hallmarks of the juvenile-to-adult transition. We find that lep-5 is a ∼600 nt cytoplasmic RNA that is conserved across Caenorhabditis and possesses three essential secondary structure motifs but no essential open reading frames. lep-5 expression is temporally controlled, peaking prior to TTM onset. Like the Makorin LEP-2, lep-5 facilitates the degradation of LIN-28, a conserved miRNA regulator specifying the juvenile state. Both LIN-28 and LEP-2 associate with lep-5 in vivo, suggesting that lep-5 directly regulates LIN-28 stability and may function as an RNA scaffold. These studies identify a key biological role for a lncRNA: by regulating protein stability, it provides a temporal cue to facilitate the juvenile-to-adult transition.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  C. elegans; RNA scaffold; developmental timing; heterochronic; lincRNA; lncRNA; male tail; morphogenesis; ncRNA

Mesh:

Substances:

Year:  2019        PMID: 30956008      PMCID: PMC6733259          DOI: 10.1016/j.devcel.2019.03.003

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  104 in total

1.  Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation.

Authors:  Kathy Seggerson; Lingjuan Tang; Eric G Moss
Journal:  Dev Biol       Date:  2002-03-15       Impact factor: 3.582

Review 2.  Unique features of long non-coding RNA biogenesis and function.

Authors:  Jeffrey J Quinn; Howard Y Chang
Journal:  Nat Rev Genet       Date:  2016-01       Impact factor: 53.242

Review 3.  Molecular mechanisms of long noncoding RNAs.

Authors:  Kevin C Wang; Howard Y Chang
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

4.  The zinc-finger protein SEA-2 regulates larval developmental timing and adult lifespan in C. elegans.

Authors:  Xinxin Huang; Hui Zhang; Hong Zhang
Journal:  Development       Date:  2011-04-06       Impact factor: 6.868

5.  Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination.

Authors:  Je-Hyun Yoon; Kotb Abdelmohsen; Jiyoung Kim; Xiaoling Yang; Jennifer L Martindale; Kumiko Tominaga-Yamanaka; Elizabeth J White; Arturo V Orjalo; John L Rinn; Stefan G Kreft; Gerald M Wilson; Myriam Gorospe
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

Review 7.  Functional Classification and Experimental Dissection of Long Noncoding RNAs.

Authors:  Florian Kopp; Joshua T Mendell
Journal:  Cell       Date:  2018-01-25       Impact factor: 41.582

Review 8.  RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts.

Authors:  Sarah Geisler; Jeff Coller
Journal:  Nat Rev Mol Cell Biol       Date:  2013-10-09       Impact factor: 94.444

9.  High Efficiency, Homology-Directed Genome Editing in Caenorhabditis elegans Using CRISPR-Cas9 Ribonucleoprotein Complexes.

Authors:  Alexandre Paix; Andrew Folkmann; Dominique Rasoloson; Geraldine Seydoux
Journal:  Genetics       Date:  2015-07-17       Impact factor: 4.562

Review 10.  lncRNAs in development and disease: from functions to mechanisms.

Authors:  M Joaquina Delás; Gregory J Hannon
Journal:  Open Biol       Date:  2017-07       Impact factor: 6.411

View more
  4 in total

1.  Dynamic, Non-binary Specification of Sexual State in the C. elegans Nervous System.

Authors:  Hannah N Lawson; Leigh R Wexler; Hayley K Wnuk; Douglas S Portman
Journal:  Curr Biol       Date:  2020-07-23       Impact factor: 10.834

2.  The Makorin lep-2 and the lncRNA lep-5 regulate lin-28 to schedule sexual maturation of the C. elegans nervous system.

Authors:  Hannah Lawson; Edward Vuong; Renee M Miller; Karin Kiontke; David Ha Fitch; Douglas S Portman
Journal:  Elife       Date:  2019-07-02       Impact factor: 8.140

3.  Developmental maturation of the hematopoietic system controlled by a Lin28b-let-7-Cbx2 axis.

Authors:  Dahai Wang; Mayuri Tanaka-Yano; Eleanor Meader; Melissa A Kinney; Vivian Morris; Edroaldo Lummertz da Rocha; Nan Liu; Tianxin Liu; Qian Zhu; Stuart H Orkin; Trista E North; George Q Daley; R Grant Rowe
Journal:  Cell Rep       Date:  2022-04-05       Impact factor: 9.995

Review 4.  The physiological function of long-noncoding RNAs.

Authors:  He Chen; Ge Shan
Journal:  Noncoding RNA Res       Date:  2020-09-17
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.