Literature DB >> 30953866

Alternative splicing, RNA-seq and drug discovery.

Shanrong Zhao1.   

Abstract

Alternative splicing, hereafter referred to as AS, is an essential component of gene expression regulation that contributes to the diversity of proteomes. Recent developments in RNA sequencing (RNA-seq) technologies, combined with the advent of computational tools, have enabled transcriptome-wide studies of AS at an unprecedented scale and resolution. RNA mis-splicing can cause human disease, and to target alternative splicing has led to the development of novel therapeutics. Splice variants diversify the repertoire of biomarkers and functionally contribute to drug resistance. Our expanding knowledge of AS variation in human populations holds great promise for improving disease diagnoses and ultimately patient care in the era of sequencing and precision medicine.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 30953866     DOI: 10.1016/j.drudis.2019.03.030

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  23 in total

1.  Developmental Expression of SULT1C4 Transcript Variants in Human Liver: Implications for Discordance Between SULT1C4 mRNA and Protein Levels.

Authors:  Sarah Dubaisi; Hailin Fang; Joseph A Caruso; Roger Gaedigk; Carrie A Vyhlidal; Thomas A Kocarek; Melissa Runge-Morris
Journal:  Drug Metab Dispos       Date:  2020-04-17       Impact factor: 3.922

Review 2.  A simple guide to de novo transcriptome assembly and annotation.

Authors:  Venket Raghavan; Louis Kraft; Fantin Mesny; Linda Rigerte
Journal:  Brief Bioinform       Date:  2022-03-10       Impact factor: 11.622

3.  Immunological significance of prognostic markers for breast cancer based on alternative splicing.

Authors:  Rong Xu; Qinglong Yang
Journal:  Am J Transl Res       Date:  2022-06-15       Impact factor: 3.940

Review 4.  Cancer Risk and Mutational Patterns Following Organ Transplantation.

Authors:  Yangyang Shen; Di Lian; Kai Shi; Yuefeng Gao; Xiaoxiang Hu; Kun Yu; Qian Zhao; Chungang Feng
Journal:  Front Cell Dev Biol       Date:  2022-06-28

Review 5.  Artificial Intelligence, Healthcare, Clinical Genomics, and Pharmacogenomics Approaches in Precision Medicine.

Authors:  Habiba Abdelhalim; Asude Berber; Mudassir Lodi; Rihi Jain; Achuth Nair; Anirudh Pappu; Kush Patel; Vignesh Venkat; Cynthia Venkatesan; Raghu Wable; Matthew Dinatale; Allyson Fu; Vikram Iyer; Ishan Kalove; Marc Kleyman; Joseph Koutsoutis; David Menna; Mayank Paliwal; Nishi Patel; Thirth Patel; Zara Rafique; Rothela Samadi; Roshan Varadhan; Shreyas Bolla; Sreya Vadapalli; Zeeshan Ahmed
Journal:  Front Genet       Date:  2022-07-06       Impact factor: 4.772

6.  Digital gene expression analyses of mammary glands from meat ewes naturally infected with clinical mastitis.

Authors:  Taotao Li; Jianfeng Gao; Xingxu Zhao; Youji Ma
Journal:  R Soc Open Sci       Date:  2019-07-03       Impact factor: 2.963

Review 7.  Advanced Evanescent-Wave Optical Biosensors for the Detection of Nucleic Acids: An Analytic Perspective.

Authors:  Cesar S Huertas; Olalla Calvo-Lozano; Arnan Mitchell; Laura M Lechuga
Journal:  Front Chem       Date:  2019-10-25       Impact factor: 5.221

8.  Sequence-Derived Markers of Drug Targets and Potentially Druggable Human Proteins.

Authors:  Sina Ghadermarzi; Xingyi Li; Min Li; Lukasz Kurgan
Journal:  Front Genet       Date:  2019-11-15       Impact factor: 4.599

9.  Full-length transcriptome analysis reveals the mechanism of acupuncture at PC6 improves cardiac function in myocardial ischemia model.

Authors:  Jing Yuan; Jun-Meng Wang; Zhi-Wei Li; Cheng-Shun Zhang; Bin Cheng; Su-Hao Yang; Bai-Tong Liu; Li-Juan Zhu; Ding-Jun Cai; Shu-Guang Yu
Journal:  Chin Med       Date:  2021-07-08       Impact factor: 5.455

Review 10.  Long noncoding RNAs in gastric cancer: From molecular dissection to clinical application.

Authors:  Yue Gao; Jun-Wei Wang; Jia-Yi Ren; Mian Guo; Cheng-Wang Guo; Shang-Wei Ning; Shan Yu
Journal:  World J Gastroenterol       Date:  2020-06-28       Impact factor: 5.742

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