Literature DB >> 30953057

Contribution of Genetic Background and Data Collection on Adverse Events of Anti-human Immunodeficiency Virus (HIV) Drugs (D:A:D) Clinical Risk Score to Chronic Kidney Disease in Swiss HIV-infected Persons With Normal Baseline Estimated Glomerular Filtration Rate.

Léna G Dietrich1, Catalina Barceló2, Christian W Thorball3,4, Lene Ryom5, Felix Burkhalter6, Barbara Hasse7, Hansjakob Furrer8, Maja Weisser9, Ana Steffen10, Enos Bernasconi11, Matthias Cavassini12, Sophie de Seigneux13, Chantal Csajka2, Jacques Fellay3,4, Bruno Ledergerber7, Philip E Tarr1.   

Abstract

BACKGROUND: In human immunodeficiency virus (HIV), the relative contribution of genetic background, clinical risk factors, and antiretrovirals to chronic kidney disease (CKD) is unknown.
METHODS: We applied a case-control design and performed genome-wide genotyping in white Swiss HIV Cohort participants with normal baseline estimated glomerular filtration rate (eGFR >90 mL/minute/1.73 m2). Univariable and multivariable CKD odds ratios (ORs) were calculated based on the Data Collection on Adverse Events of Anti-HIV Drugs (D:A:D) score, which summarizes clinical CKD risk factors, and a polygenic risk score that summarizes genetic information from 86 613 single-nucleotide polymorphisms.
RESULTS: We included 743 cases with confirmed eGFR drop to <60 mL/minute/1.73 m2 (n = 144) or ≥25% eGFR drop to <90 mL/minute/1.73 m2 (n = 599), and 322 controls (eGFR drop <15%). Polygenic risk score and D:A:D score contributed to CKD. In multivariable analysis, CKD ORs were 2.13 (95% confidence interval [CI], 1.55-2.97) in participants in the fourth (most unfavorable) vs first (most favorable) genetic score quartile; 1.94 (95% CI, 1.37-2.65) in the fourth vs first D:A:D score quartile; and 2.98 (95% CI, 2.02-4.66), 1.70 (95% CI, 1.29-2.29), and 1.83 (95% CI, 1.45-2.40), per 5 years of exposure to atazanavir/ritonavir, lopinavir/ritonavir, and tenofovir disoproxil fumarate, respectively. Participants in the first genetic score quartile had no increased CKD risk, even if they were in the fourth D:A:D score quartile.
CONCLUSIONS: Genetic score increased CKD risk similar to clinical D:A:D score and potentially nephrotoxic antiretrovirals. Irrespective of D:A:D score, individuals with the most favorable genetic background may be protected against CKD.
© The Author(s) 2019. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  HIV infection; antiretroviral therapy; chronic kidney disease; clinical risk factors; genetics

Mesh:

Substances:

Year:  2020        PMID: 30953057     DOI: 10.1093/cid/ciz280

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   20.999


  5 in total

1.  Renal injury and human immunodeficiency virus: what remains after 30 years?

Authors:  Sophie de Seigneux; Gregory M Lucas
Journal:  Nephrol Dial Transplant       Date:  2020-04-01       Impact factor: 5.992

2.  Dose of ritonavir-boosted atazanavir for HIV patient: a reappraisal based on genetic polymorphism epidemiology in Southeast Asia.

Authors:  Rujittika Mungmunpuntipantip; Viroj Wiwanitkit
Journal:  Int J Physiol Pathophysiol Pharmacol       Date:  2022-08-15

3.  Collaborative Challenges of Multi-Cohort Projects in Pharmacogenetics-Why Time Is Essential for Meaningful Collaborations.

Authors:  Filippo Franchini; Katharina Kusejko; Catia Marzolini; Christoph Tellenbach; Simona Rossi; Susanne Stampf; Michael Koller; Jivko Stoyanov; Burkhard Möller; Alexander Benedikt Leichtle
Journal:  JMIR Form Res       Date:  2022-09-29

4.  Cohort-Derived Machine Learning Models for Individual Prediction of Chronic Kidney Disease in People Living With Human Immunodeficiency Virus: A Prospective Multicenter Cohort Study.

Authors:  Jan A Roth; Gorjan Radevski; Catia Marzolini; Andri Rauch; Huldrych F Günthard; Roger D Kouyos; Christoph A Fux; Alexandra U Scherrer; Alexandra Calmy; Matthias Cavassini; Christian R Kahlert; Enos Bernasconi; Jasmina Bogojeska; Manuel Battegay
Journal:  J Infect Dis       Date:  2021-10-13       Impact factor: 7.759

Review 5.  HIV-1 and human genetic variation.

Authors:  Paul J McLaren; Jacques Fellay
Journal:  Nat Rev Genet       Date:  2021-06-24       Impact factor: 53.242

  5 in total

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