Literature DB >> 30951493

Ageing and sources of transcriptional heterogeneity.

Chrysa Nikopoulou1, Swati Parekh1, Peter Tessarz1,2.   

Abstract

Cellular heterogeneity is an important contributor to biological function and is employed by cells, tissues and organisms to adapt, compensate, respond, defend and/or regulate specific processes. Research over the last decades has revealed that transcriptional noise is a major driver for cell-to-cell variability. In this review we will discuss sources of transcriptional variability, in particular bursting of gene expression and how it could contribute to cellular states and fate decisions. We will highlight recent developments in single cell sequencing technologies that make it possible to address cellular heterogeneity in unprecedented detail. Finally, we will review recent literature, in which these new technologies are harnessed to address pressing questions in the field of ageing research, such as transcriptional noise and cellular heterogeneity in the course of ageing.

Keywords:  cellular heterogeneity; chromatin dynamics; epigenetics; single-cell biology; stochastic gene expression; transcriptional noise

Mesh:

Year:  2019        PMID: 30951493     DOI: 10.1515/hsz-2018-0449

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  7 in total

Review 1.  Capturing and Understanding the Dynamics and Heterogeneity of Gene Expression in the Living Cell.

Authors:  Amparo Pascual-Ahuir; Josep Fita-Torró; Markus Proft
Journal:  Int J Mol Sci       Date:  2020-11-05       Impact factor: 5.923

2.  Single-cell transcriptomics allows novel insights into aging and circadian processes.

Authors:  Sara S Fonseca Costa; Marc Robinson-Rechavi; Jürgen A Ripperger
Journal:  Brief Funct Genomics       Date:  2020-12-04       Impact factor: 4.241

3.  Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers.

Authors:  Michael J Petrany; Casey O Swoboda; Chengyi Sun; Kashish Chetal; Xiaoting Chen; Matthew T Weirauch; Nathan Salomonis; Douglas P Millay
Journal:  Nat Commun       Date:  2020-12-11       Impact factor: 14.919

4.  Old plasma dilution reduces human biological age: a clinical study.

Authors:  Dobri D Kiprov; Connor Luellen; Daehwan Kim; Michael Lieb; Chao Liu; Etsuko Watanabe; Xiaoyue Mei; Kaitlin Cassaleto; Joel Kramer; Michael J Conboy; Irina M Conboy
Journal:  Geroscience       Date:  2022-08-24       Impact factor: 7.581

5.  Aging is associated with increased chromatin accessibility and reduced polymerase pausing in liver.

Authors:  Mihaela Bozukova; Chrysa Nikopoulou; Niklas Kleinenkuhnen; Dora Grbavac; Katrin Goetsch; Peter Tessarz
Journal:  Mol Syst Biol       Date:  2022-09       Impact factor: 13.068

6.  Keep calm and transcribe on: chromatin changes with age, but transcription can learn to live with it.

Authors:  Cian J Lynch; Manuel Serrano
Journal:  Mol Syst Biol       Date:  2022-09       Impact factor: 13.068

7.  The RNA-binding protein Puf5 contributes to buffering of mRNA upon chromatin-mediated changes in nascent transcription.

Authors:  David Z Kochan; Julia S P Mawer; Jennifer Massen; Kiril Tishinov; Swati Parekh; Martin Graef; Anne Spang; Peter Tessarz
Journal:  J Cell Sci       Date:  2021-08-05       Impact factor: 5.285

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.