Literature DB >> 30946674

Chinese Clinical Named Entity Recognition Using Residual Dilated Convolutional Neural Network With Conditional Random Field.

Jiahui Qiu, Yangming Zhou, Qi Wang, Tong Ruan, Ju Gao.   

Abstract

Clinical named entity recognition (CNER) is a fundamental and crucial task for clinical and translation research. In recent years, deep learning methods have achieved significant success in CNER tasks. However, these methods depend greatly on recurrent neural networks (RNNs), which maintain a vector of hidden activations that are propagated through time, thus causing too much time to train models. In this paper, we propose a residual dilated convolutional neural network with the conditional random field (RD-CNN-CRF) for the Chinese CNER, which makes the model asynchronous in computation and thus speeding up the training period dramatically. To be more specific, Chinese characters and dictionary features are first projected into dense vector representations, then they are fed into the residual dilated convolutional neural network to capture contextual features. Finally, a conditional random field is employed to capture dependencies between neighboring tags and obtain the optimal tag sequence for the entire sequence. Computational results on the CCKS-2017 Task 2 benchmark dataset show that our proposed RD-CNN-CRF method competes favorably with state-of-the-art RNN-based methods both in terms of computational performance and training time.

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Year:  2019        PMID: 30946674     DOI: 10.1109/TNB.2019.2908678

Source DB:  PubMed          Journal:  IEEE Trans Nanobioscience        ISSN: 1536-1241            Impact factor:   2.935


  5 in total

Review 1.  Deep learning in clinical natural language processing: a methodical review.

Authors:  Stephen Wu; Kirk Roberts; Surabhi Datta; Jingcheng Du; Zongcheng Ji; Yuqi Si; Sarvesh Soni; Qiong Wang; Qiang Wei; Yang Xiang; Bo Zhao; Hua Xu
Journal:  J Am Med Inform Assoc       Date:  2020-03-01       Impact factor: 4.497

2.  Multi-task learning for Chinese clinical named entity recognition with external knowledge.

Authors:  Ming Cheng; Shufeng Xiong; Fei Li; Pan Liang; Jianbo Gao
Journal:  BMC Med Inform Decis Mak       Date:  2021-12-31       Impact factor: 2.796

3.  Bi-level artificial intelligence model for risk classification of acute respiratory diseases based on Chinese clinical data.

Authors:  Jiewu Leng; Dewen Wang; Xin Ma; Pengjiu Yu; Li Wei; Wenge Chen
Journal:  Appl Intell (Dordr)       Date:  2022-02-22       Impact factor: 5.019

4.  MLEE: A method for extracting object-level medical knowledge graph entities from Chinese clinical records.

Authors:  Genghong Zhao; Wenjian Gu; Wei Cai; Zhiying Zhao; Xia Zhang; Jiren Liu
Journal:  Front Genet       Date:  2022-07-22       Impact factor: 4.772

5.  A multi-layer soft lattice based model for Chinese clinical named entity recognition.

Authors:  Shuli Guo; Wentao Yang; Lina Han; Xiaowei Song; Guowei Wang
Journal:  BMC Med Inform Decis Mak       Date:  2022-07-30       Impact factor: 3.298

  5 in total

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