Literature DB >> 30946143

Ethical issues in HIV phylogenetics and molecular epidemiology.

Sanjay R Mehta1,2, Cynthia Schairer3, Susan Little4.   

Abstract

PURPOSE OF REVIEW: HIV phylogenetic and molecular epidemiology analyses are increasingly being performed with a goal of improving HIV prevention efforts. However, ethical, legal and social issues are associated with these analyses, and should be considered when performed. RECENT
FINDINGS: Several working groups have recently outlined the major issues surrounding the use of molecular epidemiology for HIV prevention. First, the benefits of HIV molecular epidemiology remain unclear, and further work is needed to quantitatively demonstrate the benefits that can be expected. Second, privacy loss is an important risk, with implications of disclosure varying by the regional legal and social climate. Inferential privacy risks will increase with technological improvements in sequencing and analysis. Third, data sharing, which enhances the utility of the data, may also increase the risk of inferential privacy loss. Mitigation strategies are available to address each of these issues.
SUMMARY: HIV molecular epidemiology for research and public health pose significant ethical issues that continue to evolve with improving technology, increased sampling and a changing legal and social climate. Guidance surrounding these issues needs to be developed for researchers and public health officials in an iterative and region specific manner that accounts for the potential benefits and risks of this technology.

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Year:  2019        PMID: 30946143      PMCID: PMC6450547          DOI: 10.1097/COH.0000000000000538

Source DB:  PubMed          Journal:  Curr Opin HIV AIDS        ISSN: 1746-630X            Impact factor:   4.283


  37 in total

1.  Toward practicing privacy.

Authors:  Cynthia Dwork; Rebecca Pottenger
Journal:  J Am Med Inform Assoc       Date:  2013-01-01       Impact factor: 4.497

2.  Patterns and correlates of PrEP drug detection among MSM and transgender women in the Global iPrEx Study.

Authors:  Albert Liu; David V Glidden; Peter L Anderson; K Rivet Amico; Vanessa McMahan; Megha Mehrotra; Javier R Lama; John MacRae; Juan Carlos Hinojosa; Orlando Montoya; Valdilea G Veloso; Mauro Schechter; Esper G Kallas; Suwat Chariyalerstak; Linda-Gail Bekker; Kenneth Mayer; Susan Buchbinder; Robert Grant
Journal:  J Acquir Immune Defic Syndr       Date:  2014-12-15       Impact factor: 3.731

3.  Impact of Public Safety Policies on Human Immunodeficiency Virus Transmission Dynamics in Tijuana, Mexico.

Authors:  Sanjay R Mehta; Antoine Chaillon; Tommi L Gaines; Patricia E Gonzalez-Zuniga; Jamila K Stockman; Horatio Almanza-Reyes; Jose Roman Chavez; Alicia Vera; Karla D Wagner; Thomas L Patterson; Brianna Scott; Davey M Smith; Steffanie A Strathdee
Journal:  Clin Infect Dis       Date:  2018-02-10       Impact factor: 9.079

4.  Recent and Rapid Transmission of HIV Among People Who Inject Drugs in Scotland Revealed Through Phylogenetic Analysis.

Authors:  Manon Ragonnet-Cronin; Celia Jackson; Amanda Bradley-Stewart; Celia Aitken; Andrew McAuley; Norah Palmateer; Rory Gunson; David Goldberg; Catriona Milosevic; Andrew J Leigh Brown
Journal:  J Infect Dis       Date:  2018-05-25       Impact factor: 5.226

5.  The emergence of HIV/AIDS in the Americas and beyond.

Authors:  M Thomas P Gilbert; Andrew Rambaut; Gabriela Wlasiuk; Thomas J Spira; Arthur E Pitchenik; Michael Worobey
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-31       Impact factor: 11.205

Review 6.  The evolution of HIV: inferences using phylogenetics.

Authors:  Eduardo Castro-Nallar; Marcos Pérez-Losada; Gregory F Burton; Keith A Crandall
Journal:  Mol Phylogenet Evol       Date:  2011-11-27       Impact factor: 4.286

7.  Local phylogenetic analysis identifies distinct trends in transmitted HIV drug resistance: implications for public health interventions.

Authors:  James I Brooks; Harrison Niznick; Marianna Ofner; Harriet Merks; Jonathan B Angel
Journal:  BMC Infect Dis       Date:  2013-10-30       Impact factor: 3.090

8.  Using HIV networks to inform real time prevention interventions.

Authors:  Susan J Little; Sergei L Kosakovsky Pond; Christy M Anderson; Jason A Young; Joel O Wertheim; Sanjay R Mehta; Susanne May; Davey M Smith
Journal:  PLoS One       Date:  2014-06-05       Impact factor: 3.240

9.  Phylogenetic patterns recover known HIV epidemiological relationships and reveal common transmission of multiple variants.

Authors:  Thomas Leitner; Ethan Romero-Severson
Journal:  Nat Microbiol       Date:  2018-07-30       Impact factor: 17.745

10.  The global transmission network of HIV-1.

Authors:  Joel O Wertheim; Andrew J Leigh Brown; N Lance Hepler; Sanjay R Mehta; Douglas D Richman; Davey M Smith; Sergei L Kosakovsky Pond
Journal:  J Infect Dis       Date:  2013-10-22       Impact factor: 5.226

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  4 in total

1.  Community and Provider Perspectives on Molecular HIV Surveillance and Cluster Detection and Response for HIV Prevention: Qualitative Findings From King County, Washington.

Authors:  Alic G Shook; Susan E Buskin; Matthew Golden; Julia C Dombrowski; Joshua Herbeck; Richard J Lechtenberg; Roxanne Kerani
Journal:  J Assoc Nurses AIDS Care       Date:  2021-10-26       Impact factor: 1.809

2.  Beyond HIV outbreaks: protocol, rationale and implementation of a prospective study quantifying the benefit of incorporating viral sequence clustering analysis into routine public health interventions.

Authors:  Jon A Steingrimsson; John Fulton; Mark Howison; Vlad Novitsky; Fizza S Gillani; Thomas Bertrand; Anna Civitarese; Katharine Howe; Guillermo Ronquillo; Benjamin Lafazia; Zoanne Parillo; Theodore Marak; Philip A Chan; Lila Bhattarai; Casey Dunn; Utpala Bandy; Nicole Alexander Scott; Joseph W Hogan; Rami Kantor
Journal:  BMJ Open       Date:  2022-04-21       Impact factor: 3.006

3.  Primary case inference in viral outbreaks through analysis of intra-host variant population.

Authors:  J Walker Gussler; David S Campo; Zoya Dimitrova; Pavel Skums; Yury Khudyakov
Journal:  BMC Bioinformatics       Date:  2022-02-08       Impact factor: 3.169

4.  What Should Health Departments Do with HIV Sequence Data?

Authors:  Ethan Romero-Severson; Arshan Nasir; Thomas Leitner
Journal:  Viruses       Date:  2020-09-12       Impact factor: 5.048

  4 in total

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