| Literature DB >> 30944713 |
Yunhua Qiu1, Jinzhou Zheng1, Jianfeng Yang1, Feng Li1, Xiqiu Zhou1, Xiaoyun Song1.
Abstract
OBJECTIVES: This study was aimed to evaluate whether single nucleotide polymorphisms (SNPs) of TLR4 and common living habits of prostate hyperplasia (BPH) patients would affect the subjects' risk and prognosis.Entities:
Keywords: Genetic variation; MDR model; Prognosis; Prostatic hyperplasia; Risk; Toll-like receptor 4
Year: 2019 PMID: 30944713 PMCID: PMC6437452 DOI: 10.22038/ijbms.2018.33173.7922
Source DB: PubMed Journal: Iran J Basic Med Sci ISSN: 2008-3866 Impact factor: 2.699
Comparison of the baseline characteristics between benign prostatic hyperplasia patients and healthy controls
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| Age | 71.43±5.31 | 70.65±6.43 | 1.87 | 0.06 | |
| Disease type | |||||
| Aggressive | 216 | - | |||
| Non-aggressive | 285 | ||||
| Smoking | |||||
| Often | 372 | 590 | |||
| None/seldom | 129 | 374 | 24.89 | <0.001 | 1.83 (1.44-2.32) |
| Alcohol | |||||
| Often | 343 | 562 | |||
| None/seldom | 158 | 402 | 14.42 | <0.001 | 1.55 (1.24-1.95) |
| BMI | |||||
| ≥24 | 301 | 522 | |||
| <24 | 200 | 442 | 4.71 | 0.03 | 1.27 (1.02-1.59) |
| IPSS | 18.64±7.51 | - | |||
| QoL | 3.08±0.92 | - | |||
| tPSA (ng/ml) | 2.14±1.20 | 1.22±1.16 | 14.23 | <0.001 | |
| TPV (ml) | 34.12±11.08 | 22.45±13.15 | 16.98 | <0.001 | |
| Qmax (ml/s) | 12.85±5.64 | 25.82±10.40 | 26 | <0.001 | |
| PVR (ml) | 23.74±10.13 | 12.63±7.31 | 24.07 | <0.001 |
BMI: body mass index; IPSS: international prostate symptom score; QoL: quality of life assessment; tPSA: total prostate specific antigen; TPV: total prostate volume; PVR: post voiding residue; OR: odds ratio; CI: confidence interval.
Association of the single nucleotide polymorphisms within toll-like receptor-4 with susceptibility to benign prostatic hyperplasia
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| rs10983755 | G>A | 361 | 128 | 12 | 613 | 308 | 43 | 850 | 152 | 1534 | 394 |
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| rs11536879 | A>G | 274 | 193 | 34 | 479 | 422 | 63 | 741 | 261 | 1380 | 548 | 0.89 | 0.75 | 1.05 | 0.172 |
| rs4986790 | A>G | 198 | 234 | 69 | 408 | 438 | 118 | 630 | 372 | 1254 | 674 | 1.10 | 0.94 | 1.29 | 0.245 |
| rs4986791 | C>T | 27 | 177 | 297 | 213 | 480 | 271 | 231 | 771 | 906 | 1022 |
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| rs1927907 | G>A | 379 | 113 | 9 | 602 | 330 | 32 | 871 | 131 | 1534 | 394 |
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| rs7873784 | G>C | 337 | 148 | 16 | 617 | 308 | 39 | 822 | 180 | 1542 | 386 | 0.87 | 0.72 | 1.06 | 0.181 |
| rs115336889 | G>C | 19 | 154 | 328 | 137 | 444 | 383 | 192 | 810 | 718 | 1210 |
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SNP: single nucleotide polymorphisms; W: wild allele; M: mutant allele.
Comparison of the single nucleotide polymorphisms within toll-like receptor-4 between aggressive and non-aggressive benign prostatic hyperplasia populations
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| rs10983755 | GG | 170 | 191 | ||||
| GA | 42 | 86 |
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| 7.85 | 0.005 | |
| AA | 4 | 8 | 0.56 | 0.16-1.90 | 0.88 | 0.347 | |
| rs11536879 | AA | 113 | 161 | ||||
| AG | 85 | 108 | 1.12 | 0.77-1.63 | 0.36 | 0.547 | |
| GG | 18 | 16 | 1.60 | 0.78-3.28 | 1.69 | 0.193 | |
| rs4986790 | AA | 86 | 112 | ||||
| AG | 94 | 140 | 0.87 | 0.60-1.28 | 0.47 | 0.493 | |
| GG | 36 | 33 | 1.42 | 0.82-2.46 | 1.58 | 0.210 | |
| rs4986791 | CC | 9 | 18 | ||||
| CT | 45 | 132 | 0.68 | 0.29-1.63 | 0.75 | 0.386 | |
| TT | 162 | 135 |
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| 4.47 | 0.035 | |
| rs1927907 | GG | 174 | 205 | ||||
| GA | 39 | 74 |
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| 4.61 | 0.032 | |
| AA | 3 | 6 | 0.59 | 0.15-2.39 | 0.56 | 0.454 | |
| rs7873784 | GG | 137 | 200 | ||||
| GC | 69 | 79 | 1.28 | 0.86-1.88 | 1.50 | 0.221 | |
| CC | 10 | 6 | 2.43 | 0.86-6.85 | 3.00 | 0.083 | |
| rs115336889 | GG | 7 | 12 | ||||
| GC | 78 | 76 | 1.76 | 0.66-4.71 | 1.29 | 0.256 | |
| CC | 131 | 197 | 1.14 | 0.44-2.97 | 0.07 | 0.789 |
SNP: single nucleotide polymorphism; OR: odds ratio; CI: confidence interval.
Association of single nucleotide polymorphisms within toll-like receptor-4 with change of international prostate symptom scoring and quality of life scoring among the benign prostatic hyperplasia population
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| rs10983755 | GG | 141 | 220 | 173 | 188 | ||||||||
| GA | 52 | 74 | 1.1 | 0.73-1.66 | 0.19 | 0.662 | 45 | 83 |
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| AA | 6 | 8 | 1.17 | 0.40-3.45 | 0.08 | 0.775 | 3 | 9 | 0.36 | 0.10-1.36 | 2.45 | 0.118 | |
| rs11536879 | AA | 115 | 159 | 126 | 148 | ||||||||
| AG | 67 | 126 | 0.74 | 0.50-1.08 | 2.51 | 0.113 | 79 | 114 | 0.81 | 0.56-1.18 | 1.17 | 0.279 | |
| GG | 17 | 17 | 1.38 | 0.68-2.82 | 0.8 | 0.372 | 16 | 18 | 1.04 | 0.51-2.13 | 0.01 | 0.906 | |
| rs4986790 | AA | 82 | 116 | 84 | 114 | ||||||||
| AG | 90 | 144 | 0.88 | 0.60-1.30 | 0.39 | 0.532 | 101 | 133 | 1.03 | 0.70-1.51 | 0.02 | 0.877 | |
| GG | 27 | 42 | 0.91 | 0.52-1.59 | 0.11 | 0.74 | 36 | 33 | 1.48 | 0.85-2.57 | 1.97 | 0.161 | |
| rs4986791 | CC | 8 | 19 | 10 | 17 | ||||||||
| CT | 41 | 136 | 0.72 | 0.29-1.76 | 0.54 | 0.464 | 75 | 102 | 1.25 | 0.54-2.89 | 0.27 | 0.6 | |
| TT | 150 | 147 |
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| 4.32 | 0.038 | 136 | 161 | 1.44 | 0.64-3.24 | 0.78 | 0.381 | |
| rs1927907 | GG | 168 | 211 | 179 | 200 | ||||||||
| GA | 25 | 88 |
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| 40 | 73 |
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| 4.93 |
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| AA | 6 | 3 | 2.51 | 0.62-10.20 | 1.77 | 0.183 | 2 | 7 | 0.32 | 0.07-1.56 | 2.21 | 0.137 | |
| rs7873784 | GG | 140 | 197 | 142 | 195 | ||||||||
| GC | 54 | 94 | 0.81 | 0.54-1.20 | 1.1 | 0.295 | 75 | 73 | 1.41 | 0.96-2.08 | 3.03 | 0.082 | |
| CC | 5 | 11 | 0.64 | 0.22-1.88 | 0.67 | 0.414 | 4 | 12 | 0.46 | 0.14-1.45 | 1.85 | 0.174 | |
| rs115336889 | GG | 3 | 16 | 5 | 14 | ||||||||
| GC | 59 | 95 | 3.31 | 0.93-11.86 | 3.73 | 0.053 | 31 | 123 | 0.71 | 0.24-2.11 | 0.39 | 0.531 | |
| CC | 137 | 191 |
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| 185 | 143 |
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| 6.56 |
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SNP: single nucleotide polymorphism; IPSS: international prostate symptom score; QoL: quality of life assessment; OR: odds ratio; CI: confidence interval.
Association of haplotypes with change of international prostate symptom scoring and quality of life scoring among the benign prostatic hyperplasia population
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| IPSS scoring | rs4986791_rs1927907 | CGC | 0.107 | 21 | 0.192 | 58 |
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| TGG | 0.125 | 25 | 0.125 | 38 | 1.00 | 0.58 | 1.71 | 0.995 | ||
| TGC | 0.657 | 131 | 0.471 | 142 |
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| TAC | 0.065 | 13 | 0.09 | 27 | 0.71 | 0.36 | 1.42 | 0.331 | ||
| QoL scoring | rs10983755_rs1927907 | GGG | 0.071 | 16 | 0.186 | 52 |
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| GGC | 0.721 | 159 | 0.503 | 141 |
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| GAC | 0.08 | 18 | 0.096 | 27 | 0.83 | 0.45 | 1.55 | 0.56 | ||
| AGC | 0.098 | 22 | 0.11 | 31 | 0.89 | 0.50 | 1.58 | 0.687 | ||
SNP: single nucleotide polymorphism; IPSS: international prostate symptom score; QoL: quality of life assessment; OR: odds ratio; LL: lower limit; UL: upper limit.
Relationship of baseline characteristics and single nucleotide polymorphisms between benign prostatic hyperplasia patients and healthy controls based on multi-factor dimensionality reduction models
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| Smoking | rs4986791 | 65.58% | 65.58% | 10/10 | 16.84 | <0.001 | 4.39 | 2.12-9.09 |
| rs4986791, rs115336889 | 77.28% | 76.99% | 10/10 | 25.22 | <0.001 | 8.24 | 3.37-20.17 | |
| Smoking, rs10983755, rs115336889 | 84.57% | 83.66% | 6/10 | 70.36 | <0.001 | 80.73 | 18.15-359.07 | |
| Alochol | rs4986791 | 65.58% | 65.58% | 10/10 | 16.84 | <0.001 |
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| rs4986791, rs115336889 | 77.28% | 76.99% | 10/10 | 25.22 | <0.001 | 8.24 | 3.37-20.17 | |
| Alochol, rs10983755, rs115336889 | 84.65% | 84.29% | 9/10 | 71.65 | <0.001 |
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| BMI | rs4986791 | 65.58% | 65.58% | 10/10 | 16.84 | <0.001 | 4.39 | 2.12-9.09 |
| BMI, rs4986791 | 78.86% | 78.86% | 10/10 | 57.26 | <0.001 | 32.66 | 10.67-99.98 | |
| BMI, rs4986791, rs115336889 | 87.65% | 87.65% | 10/10 | 70.32 | <0.001 | 41.82 | 14.46-120.99 |
CVC: Cross-validation consistency; OR: Odds ratio; CI: confidence interval; BMI: Body mass index.
Figure 1High- and low-risk combinations, hierarchial interaction graphs and interaction dendrograms drawn from establishment of multifactor dimensionality reduction models for inducing benign prostatic hyperplasia among single nucleotide polymorphisms within toll-like receptor-4 and smoking (A), drinking (B) and body mass index (C). The dark blocks were highly risky groups, and the light blocks were lowly risky groups. The vertical bar on the left side symbolized the number of cases, and the vertical bar on the right side symbolized the number of controls. BMI: body mass index