Literature DB >> 30939041

Understanding the Role of Lipids in Signaling Through Atomistic and Multiscale Simulations of Cell Membranes.

Moutusi Manna1, Tuomo Nieminen2, Ilpo Vattulainen2,3.   

Abstract

Cell signaling controls essentially all cellular processes. While it is often assumed that proteins are the key architects coordinating cell signaling, recent studies have shown more and more clearly that lipids are also involved in signaling processes in a number of ways. Lipids do, for instance, act as messengers, modulate membrane receptor conformation and dynamics, and control membrane receptor partitioning. Further, through structural modifications such as oxidation, the functions of lipids as part of signaling processes can be modified. In this context, in this article we discuss the understanding recently revealed by atomistic and coarse-grained computer simulations of nanoscale processes and underlying physicochemical principles related to lipids' functions in cellular signaling.

Entities:  

Keywords:  computer simulations; lipids; molecular dynamics; multiscale simulations; signaling

Year:  2019        PMID: 30939041     DOI: 10.1146/annurev-biophys-052118-115553

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  13 in total

Review 1.  Ion channels as lipid sensors: from structures to mechanisms.

Authors:  Mackenzie J Thompson; John E Baenziger
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

2.  Lipidome-wide characterization of phosphatidylinositols and phosphatidylglycerols on CC location level.

Authors:  Tian Xia; Hanlin Ren; Wenpeng Zhang; Yu Xia
Journal:  Anal Chim Acta       Date:  2020-07-08       Impact factor: 6.558

3.  Measuring Remodeling of the Lipid Environment Surrounding Membrane Proteins with Lipid Exchange and Native Mass Spectrometry.

Authors:  Guozhi Zhang; James E Keener; Michael T Marty
Journal:  Anal Chem       Date:  2020-04-07       Impact factor: 6.986

4.  G-Protein-Coupled Receptor-Membrane Interactions Depend on the Receptor Activation State.

Authors:  Apurba Bhattarai; Jinan Wang; Yinglong Miao
Journal:  J Comput Chem       Date:  2019-10-10       Impact factor: 3.672

Review 5.  The energetics of protein-lipid interactions as viewed by molecular simulations.

Authors:  Robin A Corey; Phillip J Stansfeld; Mark S P Sansom
Journal:  Biochem Soc Trans       Date:  2020-02-28       Impact factor: 4.919

6.  Lipids and Phosphorylation Conjointly Modulate Complex Formation of β2-Adrenergic Receptor and β-arrestin2.

Authors:  Kristyna Pluhackova; Florian M Wilhelm; Daniel J Müller
Journal:  Front Cell Dev Biol       Date:  2021-12-23

7.  Relative Affinities of Protein-Cholesterol Interactions from Equilibrium Molecular Dynamics Simulations.

Authors:  T Bertie Ansell; Luke Curran; Michael R Horrell; Tanadet Pipatpolkai; Suzanne C Letham; Wanling Song; Christian Siebold; Phillip J Stansfeld; Mark S P Sansom; Robin A Corey
Journal:  J Chem Theory Comput       Date:  2021-09-15       Impact factor: 6.578

8.  The Role of Lipids in Allosteric Modulation of Dopamine D2 Receptor-In Silico Study.

Authors:  Justyna Żuk; Damian Bartuzi; Przemysław Miszta; Agnieszka A Kaczor
Journal:  Molecules       Date:  2022-02-16       Impact factor: 4.411

9.  Binding of Ca2+-independent C2 domains to lipid membranes: A multi-scale molecular dynamics study.

Authors:  Andreas Haahr Larsen; Mark S P Sansom
Journal:  Structure       Date:  2021-06-02       Impact factor: 5.006

10.  The Role of Plasma Membrane Viscosity in the Response and Resistance of Cancer Cells to Oxaliplatin.

Authors:  Liubov Shimolina; Alexander Gulin; Nadezhda Ignatova; Irina Druzhkova; Margarita Gubina; Maria Lukina; Ludmila Snopova; Elena Zagaynova; Marina K Kuimova; Marina Shirmanova
Journal:  Cancers (Basel)       Date:  2021-12-07       Impact factor: 6.639

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.