Literature DB >> 30934371

Universality of biochemical feedback and its application to immune cells.

Amir Erez1, Tommy A Byrd2, Robert M Vogel3, Grégoire Altan-Bonnet4, Andrew Mugler2.   

Abstract

We map a class of well-mixed stochastic models of biochemical feedback in steady state to the mean-field Ising model near the critical point. The mapping provides an effective temperature, magnetic field, order parameter, and heat capacity that can be extracted from biological data without fitting or knowledge of the underlying molecular details. We demonstrate this procedure on fluorescence data from mouse T cells, which reveals distinctions between how the cells respond to different drugs. We also show that the heat capacity allows inference of the absolute molecule number from fluorescence intensity. We explain this result in terms of the underlying fluctuations, and we demonstrate the generality of our work.

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Year:  2019        PMID: 30934371     DOI: 10.1103/PhysRevE.99.022422

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  2 in total

1.  Temporal signals drive the emergence of multicellular information networks.

Authors:  Guanyu Li; Ryan LeFebre; Alia Starman; Patrick Chappell; Andrew Mugler; Bo Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-06       Impact factor: 12.779

2.  Tipping the Balance: A Criticality Perspective.

Authors:  Indrani Bose
Journal:  Entropy (Basel)       Date:  2022-03-14       Impact factor: 2.524

  2 in total

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