| Literature DB >> 30931009 |
Alexey G Gerbst1, Vadim B Krylov1, Dmitry A Argunov1, Maksim I Petruk1,2, Arsenii S Solovev1,2, Andrey S Dmitrenok1, Nikolay E Nifantiev1.
Abstract
The studies on the recently discovered pyranoside-into-furanoside rearrangement have led us to conformational investigations of furanosides upon their total sulfation. Experimental NMR data showed that in some cases drastic changes of the ring conformation occurred while sometimes only the conformation of the exocyclic C4-C5 linkage changed. Herein we describe a combined quantum chemical and NMR conformational investigation of three common monosaccharide furanosides as their propyl glycosides: α-mannose, β-glucose and β-galactose. Full exploration of the furanoside ring by means of ab initio calculations was performed and coupling constants were calculated for each of the low-energy conformers. The results demonstrated preferred trans-orientation of H4-H5 protons in the non-sulfated molecules which changed to gauche-orientation upon sulfation. The effect is less pronounced in the galactosides. For all the studied structures changes in the conformational distribution were revealed by quantum mechanical calculations, that explained the observed changes in intraring coupling constants occurring upon introduction of sulfates.Entities:
Keywords: NMR; ab initio calculations; conformational analysis; furanosides; sulfation
Year: 2019 PMID: 30931009 PMCID: PMC6423562 DOI: 10.3762/bjoc.15.63
Source DB: PubMed Journal: Beilstein J Org Chem ISSN: 1860-5397 Impact factor: 2.883
Scheme 1Studied monosaccharides 1–3 and 1s–3s and their preparation.
1H–1H NMR J coupling constants of non-sulfated (1–3) and per-O-sulfated (1s–3s) propyl furanosides.
| compound | |||||||
| 4.6 | 4.6 | 2.9 | 8.8 | 2.8 | 6.2 | −12.1 | |
| 1.2 | 5.6 | 7.0 | 2.8 | 2.4 | 7.9 | −11.4 | |
| <1 | 1.2 | 4.5 | 9.0 | 2.8 | 6.1 | −12.0 | |
| <1 | <1 (≈0.7) | 4.8 | 4.9 | 2.3 | 5.8 | −11.2 | |
| 2.4 | 4.4 | 6.8 | 4.0 | 4.3 | 7.5 | −11.7 | |
| <1 | <1 | 4.6 | 2.4 | 5.3 | 7.5 | −10.4 | |
Low-energy conformers obtained after ab initio geometry optimizations of compounds 1–3 and 1s–3s.
| compound | main low-energy conformers | value of H4–C4–C5–H5 dihedral | relative energy, kcal/mola | conformer notation | P | ν | |
| R = H | C3- | +179° | 0.0 | 23 | 39 | ||
| R = H | C1- | +178° | 0.7 | 130 | 38 | ||
| R = SO3− | C3- | +84° | 1.2 | 22 | 40 | ||
| R = SO3− | C1- | +70° | 0.0 | 131 | 39 | ||
| R = H | C2- | +174° | 0.0 | −20 | 32 | ||
| R = H | O4- | +173° | 0.2 | 88 | 41 | ||
| R = SO3− | C2- | +84° | 0.0b | −8 | 33 | ||
| R = H | C3- | −57° | 0.0 | −148 | 39 | ||
| R = H | C3- | +53° | 1.0 | −151 | 38 | ||
| R = H | C3- | +173° | 1.5 | −147 | 37 | ||
| R = H | O4- | −59° | 1.2 | −91 | 38 | ||
| R = H | O4- | +52° | 1.8 | −88 | 39 | ||
| R = SO3− | C1- | −63° | 0.0b | −65 | 37 | ||
aValues relative to the lowest energy conformer for each structure are given. bThe conformer with minimal relative energy is presented. The other conformers can be found in Supporting Information.
Figure 1The pseudo-rotation wheels showing different optimized structures of furanosides 1–3 and 1s–3s. The lower energy conformations (denoted as in Table 4) are colored in red.
Figure 2Schematic views of low energy conformers A–M. The minimal energy conformers are embedded in red frames. The substituents at C4–C5 bond located in trans-position are shown in brown. The conformers H–J and K, L only differ in the H4–C4–C5–H5 dihedral angle (see Table 4).
Best-fit conformers obtained after pseudorotaional analysis of compounds 1–3 and 1s–3s.
| compound | best-fit conformer parameters | RMSD | |
| P | ν | ||
| 20.4 | 45.3 | 0.61 | |
| 184.5 | 44.2 | 0.32 | |
| 6.2 | 33.3 | 0.36 | |
| 29.9 | 35.0 | 0.01 | |
| −155.2 | 20.4 | 0.21 | |
| −64.1 | 35.5 | 0.05 | |
Experimental 1H–1H coupling constants (Hz) and those calculated for different conformers (Hz) for furanosides 1–3 and 1s–3s.
| entry | compound | conformer notation | relative energy, kcal/mol | ||||
| 1 | experimental | – | 4.6 | 4.6 | 2.9 | 8.8 | |
| 2 | conformer | 0.0 | 4.9 | 4.4 | 2.6 | 9.6 | |
| 3 | conformer | 1.6 | 0.3 | 5.5 | 8.3 | 9.8 | |
| 4 | experimental | – | 1.2 | 5.6 | 7.0 | 2.8 | |
| 5 | conformer | 0.0 | 0.3 | 6.9 | 9.9 | 1.8 | |
| 6 | conformer | 1.2 | 5.6 | 5.0 | 2.7 | 0.5 | |
| 7 | experimental | – | <1 | 1.2 | 4.5 | 9.0 | |
| 8 | conformer | 0.0 | 0.1 | 0.5 | 5.4 | 10.0 | |
| 9 | conformer | 0.2 | 5.4 | 1.4 | 5.0 | 9.5 | |
| 10 | experimental | – | <1 | 0.7 | 4.8 | 4.9 | |
| 11 | conformer | 0.0 | 0.1 | 0.8 | 5.9 | 0.5 | |
| 12 | experimental | – | 2.4a | 4.4a | 6.8a | 4.0a | |
| 13 | conformer | 0.0 | 4.8 | 8.5 | 9.4 | 1.6 | |
| 14 | conformer | 1.0 | 5.2 | 8.1 | 9.5 | 6.3 | |
| 15 | conformer | 1.5 | 4.8 | 7.2 | 9.6 | 8.4 | |
| 16 | conformer | 1.2 | 0.3 | 1.4 | 6.9 | 6.4 | |
| 17 | conformer | 1.8 | 0.3 | 1.3 | 6.5 | 1.7 | |
| 18 | experimental | – | <1 | <1 | 4.6 | 2.4 | |
| 19 | conformer | 0.0 | 0.1 | 0.4 | 3.9 | 1.4 | |
aThe constant was obtained by second order spectrum simulation in Topspin DAISY.
Experimental 1H–1H coupling constants (Hz) for α-propyl mannofuranosides (1, 1s) and those calculated for its different conformers (Hz).
| entry | conformer notation and orientation of C5–C6 bond | relative energy, kcal/mol | |||||||
| 1 | experimental for | – | 4.6 | 4.6 | 2.9 | 8.8 | 2.8 | 6.2 | 12.1 |
| 2 | conformer | 0.0 | 4.9 | 4.4 | 2.6 | 9.6 | 2.5 | 10.3 | −8.9 |
| 3 | conformer | 1.3 | 4.8 | 4.5 | 2.7 | 9.8 | 2.7 | 1.4 | −10.6 |
| 4 | conformer | 0.7 | 0.3 | 5.7 | 8.1 | 10.1 | 2.5 | 10.2 | −9.4 |
| 5 | conformer | 2.0 | 0.3 | 5.6 | 8.4 | 10.3 | 2.7 | 1.5 | −11.2 |
| 6 | conformer | 1.6 | 0.3 | 5.5 | 8.3 | 9.8 | 10.1 | 3.1 | −12.2 |
| 7 | experimental for | – | 1.2 | 5.6 | 7.0 | 2.8 | 2.4 | 7.9 | 11.4 |
| 8 | conformer | 0.0 | 0.3 | 6.9 | 9.9 | 1.8 | 1.7 | 10.2 | −11.8 |
| 9 | conformer | 3.6 | 0.3 | 7.0 | 10.0 | 1.9 | 5.8 | 0.5 | −12.1 |
| 10 | conformer | 1.2 | 5.6 | 5.0 | 2.7 | 0.5 | 1.9 | 10.0 | −11.2 |
| 11 | conformer | 3.6 | 6.2 | 4.9 | 2.7 | 0.6 | 5.6 | 0.5 | −11.5 |
aThe sign of the constant was not determined experimentally.
Figure 3Denotation of conformers obtained during rotation around C5–C6 bond.
1H NMR chemical shifts of non-sulfated (1–3a) and per-O-sulfated (1s–3sb) propyl furanosides.
| compound | 1H (δ, ppm) | ||||||
| H(1) | H(2) | H(3) | H(4) | H(5) | H(6a) | H(6b) | |
| 4.96 | 4.07 | 4.24 | 3.98 | 3.84 | 3.72 | 3.54 | |
| 5.33 | 4.77 | 5.29 | 4.79 | 4.89 | 4.47 | 4.17 | |
| 4.89 | 4.05 | 4.15 | 4.06 | 3.89 | 3.76 | 3.59 | |
| 5.29 | 5.05 | 5.03 | 4.74 | 4.88 | 4.55 | 4.24 | |
| 4.92 | 3.97 | 4.00 | 3.88 | 3.74 | 3.63 | 3.58 | |
| 5.36 | 4.83 | 5.05 | 4.44 | 4.90 | 4.35 | 4.25 | |
a 1H chemical shifts for the propyl aglycon in non-sulfated compounds: H(1а) = 3.63; H(1b) = 3.47; H(2) = 1.51; H(3) = 0.82 ppm; b 1H chemical shifts for the propyl aglycon in per-O-sulfated compounds: H(1а) = 3.69; H(1b) = 3.59; H(2) = 1.61; H(3) = 0.91 ppm.
13C NMR chemical shifts of non-sulfated (1–3a) and per-O-sulfated (1s–3sb) propyl furanosides.
| compound | 13C (δ, ppm) | |||||
| C(1) | C(2) | C(3) | C(4) | C(5) | C(6) | |
| 107.4 | 76.7 | 71.1 | 79.1 | 69.0 | 63.0 | |
| 104.0 | 78.3 | 75.0 | 77.1 | 76.2 | 66.9 | |
| 108.0 | 79.6 | 74.7 | 80.9 | 69.5 | 63.4 | |
| 106.9 | 83.0 | 78.9 | 80.8 | 75.8 | 67.8 | |
| 107.0 | 80.9 | 76.4 | 82.3 | 70.8 | 62.8 | |
| 105.5 | 84.9 | 81.4 | 81.4 | 74.6 | 66.3 | |
a 13C chemical shifts for the propyl aglycon in non-sulfated compounds: C(1) = 71.4; C(2) = 22.2; C(3) = 9.7 ppm; b 13C chemical shifts for the propyl aglycon in per-O-sulfated compounds: C(1) = 70.4; C(2) = 22.1; C(3) = 9.9 ppm.