| Literature DB >> 30930917 |
Jing Zhang1, Simerjeet Virk1, Wesley Porter1, Kevin Kenworthy2, Dana Sullivan3, Brian Schwartz1.
Abstract
Recent advances in remote sensing technology, especially in the area of Unmanned Aerial Vehicles (UAV) and Unmanned Aerial Systems (UASs) provide opportunities for turfgrass breeders to collect more comprehensive data during early stages of selection as well as in advanced trials. The goal of this study was to assess the use of UAV-based aerial imagery on replicated turfgrass field trials. Both visual (RGB) images and multispectral images were acquired with a small UAV platform on field trials of bermudagrass (Cynodon spp.) and zoysiagrass (Zoysia spp.) with plot sizes of 1.8 by 1.8 m and 0.9 by 0.9 m, respectively. Color indices and vegetation indices were calculated from the data extracted from UAV-based RGB images and multispectral images, respectively. Ground truth measurements including visual turfgrass quality, percent green cover, and normalized difference vegetation index (NDVI) were taken immediately following each UAV flight. Results from the study showed that ground-based NDVI can be predicted using UAV-based NDVI (R 2 = 0.90, RMSE = 0.03). Ground percent green cover can be predicted using both UAV-based NDVI (R 2 = 0.86, RMSE = 8.29) and visible atmospherically resistant index (VARI, R 2 = 0.87, RMSE = 7.77), warranting the use of the more affordable RGB camera to estimate ground percent green cover. Out of the top ten entries identified using ground measurements, 92% (12 out of 13 in bermudagrass) and 80% (9 out of 11 in zoysiagrass) overlapped with those using UAV-based imagery. These results suggest that UAV-based high-resolution imagery is a reliable and powerful tool for assessing turfgrass performance during variety trials.Entities:
Keywords: bermudagrass; drought; normalized difference vegetation index; remote sensing; visible atmospherically resistant index; zoysiagrass
Year: 2019 PMID: 30930917 PMCID: PMC6430071 DOI: 10.3389/fpls.2019.00279
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
FIGURE 1(A) Back view of Unmanned aerial vehicle (3DR Solo quadcopter). (B) Front view of UAV with GoPro RGB camera. (C) Parrot Sequoia multispectral camera mounted on UAV. (D) UAV with multispectral camera waiting to take off in the field.
FIGURE 2Workflow of raster image process and data acquisition. (A) Reflectance image on red band. (B) Reflectance image on near infrared band. (C) Calculated NDVI image using a. and b. through the equation. (D) Polygons represent individual field plot. (E) Average NDVI value for each plot using zonal statistics based on C and D. For illustration purpose, the plots are bermudagrass plots.
Equations for color indices used in the study.
| Indices | Equation | Reference |
|---|---|---|
| NDVI: normalized difference vegetation index | (RNIR−RRed)/(RNIR+RRed) | |
| GNDVI: green normalized difference vegetation index | (RNIR−RGreen)/(RNIR+RGreen) | |
| NDRI: normalized red edge index | (RNIR−RRededge)/(RNIR+RRededge) | |
| NDI: normalized difference index | (g−r)/(g+r) | |
| ExG: excessive green index | 2g−r−b | |
| ExR: excessive red | 1.4r−g | |
| ExGR: excessive green index minus excess red index | 3g−2.4r−b | |
| VARI: visible atmospherically resistant index | (g−r)/(g+r−b) | |
| GLI: green leaf index | (2g−b−r)/(2g+b+r) |
FIGURE 3Maximum and minimum daily temperature and precipitation of the study area in (A) September 2017 and (B) April, May, and June 2018. Arrows indicate when the data were collected.
FIGURE 4Boxplots of (A) Percent green cover (PGC). (B) Turfgrass quality (TQ). (C) Ground NDVI. (D) UAV-based NDVI in bermudagrass and zoysiagrass field trials from September 2017 to June 2018.
Spearman’s rank correlation coefficients between ground measurements (TQ, PGC, and NDVI.G) and UAV-based measurements (NDVI.U, GNDVI.U, NDRI.U, VARI, NDI, ExG, ExR, ExGR, and GLI) in bermudagrass and zoysiagrass variety trials from September 2017 to June 2018 in Tifton, GA.
| Ground measurements | UAV-based Measurements | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| PGC | NDVI.G | NDVI.U | GNDVI.U | NDRI.U | VARI | NDI | ExG | ExR | ExGR | GLI | |
| TQ† | 0.65 | 0.66 | 0.64 | 0.59 | 0.60 | 0.59 | 0.48 | 0.44 | −0.28 | 0.53 | 0.63 |
| PGC | 0.88 | 0.89 | 0.82 | 0.68 | 0.88 | 0.56 | 0.66 | −0.70 | 0.79 | 0.79 | |
| NDVI.G | 0.92 | 0.88 | 0.76 | 0.88 | 0.60 | 0.67 | −0.68 | 0.79 | 0.81 | ||
| NDVI.U | 0.98 | 0.76 | 0.91 | 0.49 | 0.80 | −0.81 | 0.90 | 0.90 | |||
| GNDVI.U | 0.73 | 0.85 | 0.38 | 0.82 | −0.82 | 0.90 | 0.89 | ||||
| NDRI.U | 0.70 | 0.41 | 0.67 | −0.59 | 0.72 | 0.76 | |||||
| VARI | 0.69 | 0.69 | −0.78 | −0.78 | 0.84 | ||||||
| NDI | 0.12 | −0.19 | 0.30 | 0.38 | |||||||
| ExG | −0.89 | 0.95 | 0.93 | ||||||||
| ExR | −0.92 | −0.82 | |||||||||
| ExGR | 0.97 | ||||||||||
Regressions between ground measurements including percent green cover (PGC), turfgrass quality (TQ), and ground normalized difference vegetation index (NDVI.G) and UAV-based measurements including NDVI.G and visible atmospherically resistant index (VARI).
| Adjusted | RMSE† | ||
|---|---|---|---|
| PGC (%) = 217.11 × NDVI.U − 73.27 | 0.88 | ∗∗∗ | 7.37 |
| PGC (%) = 567.35 × VARI + 33.86 | 0.89 | ∗∗∗ | 6.94 |
| TQ = 9.19 × NDVI.U − 0.58 | 0.68 | ∗∗∗ | 0.58 |
| TQ = 22.92 × VARI + 4.00 | 0.63 | ∗∗∗ | 0.62 |
| NDVI.G = 0.85 × NDVI.U − 0.08 | 0.86 | ∗∗∗ | 0.03 |
| PGC (%) = 140.39 × NDVI.U − 30.88 | 0.73 | ∗∗∗ | 7.70 |
| PGC (%) = 693.31 × VARI + 35.02 | 0.69 | ∗∗∗ | 8.24 |
| TQ = 4.41 × NDVI.U + 1.78 | 0.13 | ∗∗∗ | 1.04 |
| TQ = 14.17 × VARI +3.86 | 0.05 | ∗∗ | 1.09 |
| NDVI.G = 0.73 × NDVI.U − 0.06 | 0.84 | ∗∗∗ | 0.03 |
| PGC (%) = 177.49 × NDVI.U − 48.74 | 0.86 | ∗∗∗ | 8.29 |
| PGC (%) = 571.61 × VARI + 34.38 | 0.87 | ∗∗∗ | 7.77 |
| TQ = 7.47 × NDVI.U + 0.41 | 0.49 | ∗∗∗ | 0.87 |
| TQ = 23.21 × VARI + 3.92 | 0.47 | ∗∗∗ | 0.89 |
| NDVI.G = 0.91 × NDVI.U − 0.13 | 0.90 | ∗∗∗ | 0.03 |
FIGURE 5Linear regressions in predicting percent green cover (PGC) using (A) Ground NDVI, (B) UAV-based NDVI, and (C) VARI. (D) In predicting ground NDVI using UAV-based NDVI. Triangle points represented zoysiagrass and circled points represented bermudagrass.
Turf performance index (TPI) and genotypic ranking using ground measurements (percent green cover and ground NDVI) and UAV-based measurements (NDVI and VARI) in bermudagrass and zoysiagrass from September 2017 to June 2018.
| Ground | UAV | Ground | UAV | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Bermudagrass | TPI† | Rank | TPI‡ | Rank | Zoysiagrass | TPI | Rank | TPI | Rank |
| Tif16118 | 8 | 1 | 8 | 1 | DALZ1409 | 7 | 1 | 8 | 1 |
| Tif16116 | 8 | 1 | 5 | 5 | DALZ1604 | 7 | 1 | 8 | 1 |
| Tif16115 | 7 | 3 | 7 | 2 | DALZ1606 | 7 | 1 | 5 | 5 |
| TifTuf | 7 | 3 | 6 | 3 | Palisades | 7 | 1 | 4 | 10 |
| Tif16110 | 7 | 3 | 5 | 5 | DALZ1614 | 5 | 5 | 7 | 3 |
| Tif16112 | 7 | 3 | 5 | 5 | Empire | 5 | 5 | 6 | 4 |
| OSU1337 | 6 | 7 | 6 | 3 | FZ1440 | 5 | 5 | 5 | 5 |
| Tif16106 | 6 | 7 | 3 | 10 | FAES1335 | 5 | 5 | 4 | 10 |
| OSU1439 | 6 | 7 | 3 | 10 | FAES1322 | 5 | 5 | 4 | 10 |
| OSU1406 | 5 | 10 | 5 | 5 | DALZ1625 | 5 | 5 | 3 | 20 |
| Tif16102 | 5 | 10 | 4 | 9 | DALZ1410 | 5 | 5 | 2 | 32 |
| Tif16104 | 5 | 10 | 3 | 10 | FZ1427 | 4 | 12 | 5 | 5 |
| Tif16117 | 5 | 10 | 0 | 27 | DALZ1605 | 4 | 12 | 4 | 10 |
| OSU1408 | 4 | 14 | 3 | 10 | FZ1436 | 4 | 12 | 3 | 20 |
| Tif16105 | 4 | 14 | 3 | 10 | FZ1327 | 4 | 12 | 2 | 32 |
| Tif16114 | 4 | 14 | 1 | 18 | DALZ1611 | 3 | 16 | 4 | 10 |
| Tif16108 | 3 | 16 | 3 | 10 | DALZ1311 | 3 | 16 | 3 | 20 |
| OSU1433 | 3 | 16 | 1 | 18 | DALZ1603 | 3 | 16 | 3 | 20 |
| OSU1418 | 3 | 16 | 1 | 18 | FAES1313 | 3 | 16 | 3 | 20 |
| Tif16103 | 3 | 16 | 0 | 27 | DALZ1609 | 3 | 16 | 3 | 20 |
| Tif16107 | 3 | 16 | 0 | 27 | FZ1309 | 3 | 16 | 3 | 20 |
| Tif16101 | 3 | 16 | 0 | 27 | DALZ1408 | 3 | 16 | 2 | 32 |
| Tif16113 | 2 | 23 | 2 | 16 | DALZ1313 | 3 | 16 | 2 | 32 |
| Tifway | 2 | 23 | 2 | 16 | FZ1252 | 3 | 16 | 2 | 32 |
| OSU1412 | 2 | 23 | 1 | 18 | FZ1410 | 3 | 16 | 2 | 32 |
| Latitude36 | 2 | 23 | 1 | 18 | FZ1407 | 2 | 26 | 4 | 10 |
| OSU1402 | 2 | 23 | 1 | 18 | FAES1336 | 2 | 26 | 4 | 10 |
| OSU1403 | 2 | 23 | 1 | 18 | FZ1429 | 2 | 26 | 4 | 10 |
| OSU1417 | 2 | 23 | 0 | 27 | DALZ1310 | 2 | 26 | 3 | 20 |
| OSU1257 | 2 | 23 | 0 | 27 | Zeon | 2 | 26 | 2 | 32 |
| Tif16119 | 2 | 23 | 0 | 27 | DALZ1626 | 2 | 26 | 1 | 40 |
| OSU1435 | 2 | 23 | 0 | 27 | FZ1337 | 2 | 26 | 1 | 40 |
| OSU1414 | 1 | 33 | 1 | 18 | FZ1422 | 1 | 33 | 5 | 5 |
| OSU1425 | 1 | 33 | 0 | 27 | DALZ1613 | 1 | 33 | 4 | 10 |
| Tif16109 | 1 | 33 | 0 | 27 | FAES1337 | 1 | 33 | 3 | 20 |
| Tif16120 | 1 | 33 | 0 | 27 | DALZ1601 | 1 | 33 | 3 | 20 |
| OSU1423 | 1 | 33 | 0 | 27 | DALZ1607 | 1 | 33 | 3 | 20 |
| Tif16111 | 1 | 33 | 0 | 27 | FZ1333 | 1 | 33 | 1 | 40 |
| OSU1318 | 0 | 38 | 1 | 18 | DALZ1314 | 0 | 39 | 5 | 5 |
| Celebration | 0 | 38 | 0 | 27 | DALZ1615 | 0 | 39 | 4 | 10 |
| OSU1310 | 0 | 38 | 0 | 27 | FAES1307 | 0 | 39 | 3 | 20 |
| OSU1409 | 0 | 38 | 0 | 27 | FAES1319 | 0 | 39 | 2 | 32 |
| OSU1415 | 0 | 38 | 0 | 27 | FAES1312 | 0 | 39 | 1 | 40 |
| OSU1420 | 0 | 38 | 0 | 27 | |||||
Turf performance index (TPI) based on TQ, percent green cover, ground NDVI, UAV-based NDVI and VARI and genotypic ranking based on TPI in bermudagrass and zoysiagrass from September 2017 to June 2018.
| All dates | Drought | All dates | Drought | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Bermudagrass | TPI† | Rank | TPI‡ | Rank | Zoysiagrass | TPI | Rank | TPI | Rank |
| Tif16118 | 19 | 1 | 10 | 1 | DALZ1409 | 19 | 1 | 10 | 1 |
| Tif16115 | 17 | 2 | 10 | 1 | DALZ1604 | 19 | 1 | 9 | 2 |
| TifTuf | 17 | 2 | 10 | 1 | DALZ1606 | 16 | 3 | 8 | 5 |
| OSU1337 | 16 | 4 | 6 | 9 | DALZ1614 | 15 | 4 | 9 | 2 |
| Tif16110 | 16 | 4 | 8 | 5 | Empire | 14 | 5 | 9 | 2 |
| Tif16116 | 16 | 4 | 9 | 4 | Palisades | 14 | 5 | 7 | 8 |
| Tif16112 | 15 | 7 | 6 | 9 | FAES1335 | 13 | 7 | 7 | 8 |
| OSU1406 | 14 | 8 | 7 | 6 | FZ1427 | 13 | 7 | 8 | 5 |
| Tif16106 | 12 | 9 | 7 | 6 | DALZ1605 | 12 | 9 | 6 | 10 |
| OSU1439 | 11 | 10 | 3 | 15 | FAES1322 | 12 | 9 | 8 | 5 |
| Tif16102 | 11 | 10 | 7 | 6 | FZ1440 | 12 | 9 | 6 | 10 |
| Tif16104 | 11 | 10 | 5 | 12 | DALZ1311 | 10 | 12 | 4 | 19 |
| OSU1408 | 9 | 13 | 4 | 13 | DALZ1611 | 10 | 12 | 6 | 10 |
| Tif16105 | 9 | 13 | 6 | 9 | DALZ1625 | 10 | 12 | 5 | 13 |
| OSU1412 | 6 | 15 | 3 | 15 | FZ1422 | 10 | 12 | 4 | 19 |
| OSU1433 | 6 | 15 | 3 | 15 | DALZ1410 | 9 | 16 | 5 | 13 |
| Tif16108 | 6 | 15 | 1 | 21 | FAES1313 | 9 | 16 | 5 | 13 |
| Tif16113 | 6 | 15 | 1 | 21 | FAES1336 | 9 | 16 | 5 | 13 |
| Tif16114 | 6 | 15 | 1 | 21 | FZ1436 | 9 | 16 | 3 | 30 |
| Tif16117 | 6 | 15 | 4 | 13 | DALZ1314 | 8 | 20 | 5 | 13 |
| Tifway | 5 | 21 | 2 | 18 | DALZ1408 | 8 | 20 | 4 | 19 |
| OSU1417 | 4 | 22 | 2 | 18 | DALZ1603 | 8 | 20 | 3 | 30 |
| OSU1418 | 4 | 22 | 1 | 21 | DALZ1609 | 8 | 20 | 4 | 19 |
| Tif16103 | 4 | 22 | 1 | 21 | FZ1327 | 8 | 20 | 4 | 19 |
| Tif16107 | 4 | 22 | 0 | 33 | FZ1407 | 8 | 20 | 4 | 19 |
| Latitude36 | 3 | 26 | 1 | 21 | FZ1429 | 8 | 20 | 4 | 19 |
| OSU1257 | 3 | 26 | 1 | 21 | DALZ1310 | 7 | 27 | 3 | 30 |
| OSU1402 | 3 | 26 | 1 | 21 | DALZ1313 | 7 | 27 | 4 | 19 |
| OSU1403 | 3 | 26 | 1 | 21 | DALZ1613 | 7 | 27 | 4 | 19 |
| Tif16101 | 3 | 26 | 1 | 21 | FAES1337 | 7 | 27 | 2 | 37 |
| Tif16119 | 3 | 26 | 2 | 18 | FZ1252 | 7 | 27 | 4 | 19 |
| OSU1414 | 2 | 32 | 0 | 33 | FZ1309 | 7 | 27 | 5 | 13 |
| OSU1425 | 2 | 32 | 1 | 21 | Zeon | 6 | 33 | 4 | 19 |
| OSU1435 | 2 | 32 | 1 | 21 | DALZ1615 | 5 | 34 | 3 | 30 |
| Tif16109 | 2 | 32 | 0 | 33 | FAES1307 | 5 | 34 | 3 | 30 |
| Tif16120 | 2 | 32 | 0 | 33 | FAES1319 | 5 | 34 | 3 | 30 |
| OSU1318 | 1 | 37 | 0 | 33 | FZ1410 | 5 | 34 | 2 | 37 |
| OSU1423 | 1 | 37 | 0 | 33 | DALZ1601 | 4 | 38 | 2 | 37 |
| Tif16111 | 1 | 37 | 0 | 33 | DALZ1607 | 4 | 38 | 3 | 30 |
| Celebration | 0 | 40 | 0 | 33 | DALZ1626 | 4 | 38 | 2 | 37 |
| OSU1310 | 0 | 40 | 0 | 33 | FZ1337 | 4 | 38 | 2 | 37 |
| OSU1409 | 0 | 40 | 0 | 33 | FAES1312 | 3 | 42 | 1 | 42 |
| OSU1415 | 0 | 40 | 0 | 33 | FZ1333 | 3 | 42 | 1 | 42 |
| OSU1420 | 0 | 40 | 0 | 33 | |||||