Literature DB >> 30930118

Intraclonal Plasticity in Mammary Tumors Revealed through Large-Scale Single-Cell Resolution 3D Imaging.

Anne C Rios1, Bianca D Capaldo2, François Vaillant2, Bhupinder Pal2, Ravian van Ineveld3, Caleb A Dawson2, Yunshun Chen4, Emma Nolan2, Nai Yang Fu2, Felicity C Jackling2, Sapna Devi5, David Clouston6, Lachlan Whitehead7, Gordon K Smyth8, Scott N Mueller5, Geoffrey J Lindeman9, Jane E Visvader10.   

Abstract

Breast tumors are inherently heterogeneous, but the evolving cellular organization through neoplastic progression is poorly understood. Here we report a rapid, large-scale single-cell resolution 3D imaging protocol based on a one-step clearing agent that allows visualization of normal tissue architecture and entire tumors at cellular resolution. Imaging of multicolor lineage-tracing models of breast cancer targeted to either basal or luminal progenitor cells revealed profound clonal restriction during progression. Expression profiling of clones arising in Pten/Trp53-deficient tumors identified distinct molecular signatures. Strikingly, most clones harbored cells that had undergone an epithelial-to-mesenchymal transition, indicating widespread, inherent plasticity. Hence, an integrative pipeline that combines lineage tracing, 3D imaging, and clonal RNA sequencing technologies offers a comprehensive path for studying mechanisms underlying heterogeneity in whole tumors.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  3D imaging; EMT; Elf5; breast cancer; cell-of-origin; clonal competition; lineage tracing; luminal progenitor; plasticity; tumor suppressor

Year:  2019        PMID: 30930118     DOI: 10.1016/j.ccell.2019.02.010

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  56 in total

1.  Intravital microscopy of dynamic single-cell behavior in mouse mammary tissue.

Authors:  Anne C Rios; Jane E Visvader; Caleb A Dawson; Scott N Mueller; Geoffrey J Lindeman
Journal:  Nat Protoc       Date:  2021-02-24       Impact factor: 13.491

Review 2.  Tutorial: practical considerations for tissue clearing and imaging.

Authors:  Kurt R Weiss; Fabian F Voigt; Douglas P Shepherd; Jan Huisken
Journal:  Nat Protoc       Date:  2021-05-21       Impact factor: 13.491

Review 3.  Neural crest lineage analysis: from past to future trajectory.

Authors:  Weiyi Tang; Marianne E Bronner
Journal:  Development       Date:  2020-10-23       Impact factor: 6.868

4.  Display of Native Antigen on cDC1 That Have Spatial Access to Both T and B Cells Underlies Efficient Humoral Vaccination.

Authors:  Yu Kato; Thiago M Steiner; Hae-Young Park; Rohan O Hitchcock; Ali Zaid; Jyh Liang Hor; Sapna Devi; Gayle M Davey; David Vremec; Kirsteen M Tullett; Peck S Tan; Fatma Ahmet; Scott N Mueller; Sylvie Alonso; David M Tarlinton; Hidde L Ploegh; Tsuneyasu Kaisho; Lynette Beattie; Jonathan H Manton; Daniel Fernandez-Ruiz; Ken Shortman; Mireille H Lahoud; William R Heath; Irina Caminschi
Journal:  J Immunol       Date:  2020-08-24       Impact factor: 5.422

Review 5.  Emerging role of tumor cell plasticity in modifying therapeutic response.

Authors:  Siyuan Qin; Jingwen Jiang; Yi Lu; Edouard C Nice; Canhua Huang; Jian Zhang; Weifeng He
Journal:  Signal Transduct Target Ther       Date:  2020-10-07

6.  Multi-color clonal tracking reveals intra-stage proliferative heterogeneity during mammary tumor progression.

Authors:  Stefanie Tiede; Ravi Kiran Reddy Kalathur; Fabiana Lüönd; Luca von Allmen; Barbara Maria Szczerba; Mathias Hess; Tatjana Vlajnic; Benjamin Müller; James Canales Murillo; Nicola Aceto; Gerhard Christofori
Journal:  Oncogene       Date:  2020-10-12       Impact factor: 9.867

7.  Modeling Breast Cancer Using CRISPR-Cas9-Mediated Engineering of Human Breast Organoids.

Authors:  Johanna F Dekkers; James R Whittle; François Vaillant; Huei-Rong Chen; Caleb Dawson; Kevin Liu; Maarten H Geurts; Marco J Herold; Hans Clevers; Geoffrey J Lindeman; Jane E Visvader
Journal:  J Natl Cancer Inst       Date:  2020-05-01       Impact factor: 13.506

Review 8.  Recent advances in lineage tracing for the kidney.

Authors:  Yoshiharu Muto; Benjamin D Humphreys
Journal:  Kidney Int       Date:  2021-07-01       Impact factor: 10.612

Review 9.  Spatial omics and multiplexed imaging to explore cancer biology.

Authors:  Verena C Wimmer; Delphine Merino; Kelly L Rogers; Shalin H Naik; Sabrina M Lewis; Marie-Liesse Asselin-Labat; Quan Nguyen; Jean Berthelet; Xiao Tan
Journal:  Nat Methods       Date:  2021-08-02       Impact factor: 28.547

10.  HER2 Isoforms Uniquely Program Intratumor Heterogeneity and Predetermine Breast Cancer Trajectories During the Occult Tumorigenic Phase.

Authors:  Joshua D Ginzel; Chaitanya R Acharya; Veronica Lubkov; Robert D Cardiff; Alexander D Borowsky; H Kim Lyerly; Joshua C Snyder; Hidetoshi Mori; Peter G Boone; Lauren K Rochelle; Wendy L Roberts; Jeffrey I Everitt; Zachary C Hartman; Erika J Crosby; Lawrence S Barak; Marc G Caron; Jane Q Chen; Neil E Hubbard
Journal:  Mol Cancer Res       Date:  2021-06-15       Impact factor: 5.852

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