Literature DB >> 30926673

Quantitative Microproteomics Based Characterization of the Central and Peripheral Nervous System of a Mouse Model of Krabbe Disease.

Davide Pellegrini1,2, Ambra Del Grosso1,3, Lucia Angella3, Nadia Giordano4, Marialaura Dilillo2, Ilaria Tonazzini3, Matteo Caleo4, Marco Cecchini1,3, Liam A McDonnell5,6.   

Abstract

Krabbe disease is a rare, childhood lysosomal storage disorder caused by a deficiency of galactosylceramide beta-galactosidase (GALC). The major effect of GALC deficiency is the accumulation of psychosine in the nervous system and widespread degeneration of oligodendrocytes and Schwann cells, causing rapid demyelination. The molecular mechanisms of Krabbe disease are not yet fully elucidated and a definite cure is still missing. Here we report the first in-depth characterization of the proteome of the Twitcher mouse, a spontaneous mouse model of Krabbe disease, to investigate the proteome changes in the Central and Peripheral Nervous System. We applied a TMT-based workflow to compare the proteomes of the corpus callosum, motor cortex and sciatic nerves of littermate homozygous Twitcher and wild-type mice. More than 400 protein groups exhibited differences in expression and included proteins involved in pathways that can be linked to Krabbe disease, such as inflammatory and defense response, lysosomal proteins accumulation, demyelination, reduced nervous system development and cell adhesion. These findings provide new insights on the molecular mechanisms of Krabbe disease, representing a starting point for future functional experiments to study the molecular pathogenesis of Krabbe disease. Data are available via ProteomeXchange with identifier PXD010594.
© 2019 Pellegrini et al.

Entities:  

Keywords:  Autophagy; Inflammation; Mass Spectrometry; Mouse models; Neurobiology*; Neurodegenerative diseases*; Pathway Analysis; Protein Identification*; Quantification; TMT labeling; laser capture microdissection

Mesh:

Substances:

Year:  2019        PMID: 30926673      PMCID: PMC6553931          DOI: 10.1074/mcp.RA118.001267

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  109 in total

1.  Metabolic profiling reveals biochemical pathways and potential biomarkers associated with the pathogenesis of Krabbe disease.

Authors:  Nadav I Weinstock; Lawrence Wrabetz; M Laura Feltri; Daesung Shin
Journal:  J Neurosci Res       Date:  2016-11       Impact factor: 4.164

2.  Bone marrow transplantation increases efficacy of central nervous system-directed enzyme replacement therapy in the murine model of globoid cell leukodystrophy.

Authors:  Elizabeth Y Qin; Jacqueline A Hawkins-Salsbury; Xuntian Jiang; Adarsh S Reddy; Nuri B Farber; Daniel S Ory; Mark S Sands
Journal:  Mol Genet Metab       Date:  2012-06-01       Impact factor: 4.797

3.  Later onset phenotypes of Krabbe disease: results of the world-wide registry.

Authors:  Patricia K Duffner; Amy Barczykowski; Denise M Kay; Kabir Jalal; Li Yan; Ahmed Abdelhalim; Steven Gill; Ann Lindley Gill; Randy Carter
Journal:  Pediatr Neurol       Date:  2012-05       Impact factor: 3.372

Review 4.  Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy.

Authors:  Vladimir Rogov; Volker Dötsch; Terje Johansen; Vladimir Kirkin
Journal:  Mol Cell       Date:  2014-01-23       Impact factor: 17.970

5.  A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells.

Authors:  Ken Cadwell; John Y Liu; Sarah L Brown; Hiroyuki Miyoshi; Joy Loh; Jochen K Lennerz; Chieko Kishi; Wumesh Kc; Javier A Carrero; Steven Hunt; Christian D Stone; Elizabeth M Brunt; Ramnik J Xavier; Barry P Sleckman; Ellen Li; Noboru Mizushima; Thaddeus S Stappenbeck; Herbert W Virgin
Journal:  Nature       Date:  2008-10-05       Impact factor: 49.962

6.  The FTLD risk factor TMEM106B and MAP6 control dendritic trafficking of lysosomes.

Authors:  Benjamin M Schwenk; Christina M Lang; Sebastian Hogl; Sabina Tahirovic; Denise Orozco; Kristin Rentzsch; Stefan F Lichtenthaler; Casper C Hoogenraad; Anja Capell; Christian Haass; Dieter Edbauer
Journal:  EMBO J       Date:  2013-12-19       Impact factor: 11.598

7.  Quantitative proteomic analysis of Niemann-Pick disease, type C1 cerebellum identifies protein biomarkers and provides pathological insight.

Authors:  Stephanie M Cologna; Xiao-Sheng Jiang; Peter S Backlund; Celine V M Cluzeau; Michelle K Dail; Nicole M Yanjanin; Stephan Siebel; Cynthia L Toth; Hyun-sik Jun; Christopher A Wassif; Alfred L Yergey; Forbes D Porter
Journal:  PLoS One       Date:  2012-10-29       Impact factor: 3.240

8.  Tissue Localization of Glycosphingolipid Accumulation in a Gaucher Disease Mouse Brain by LC-ESI-MS/MS and High-Resolution MALDI Imaging Mass Spectrometry.

Authors:  E Ellen Jones; Wujuan Zhang; Xueheng Zhao; Cristine Quiason; Stephanie Dale; Sheerin Shahidi-Latham; Gregory A Grabowski; Kenneth D R Setchell; Richard R Drake; Ying Sun
Journal:  SLAS Discov       Date:  2017-07-17       Impact factor: 3.341

9.  Role of extracellular calcium and mitochondrial oxygen species in psychosine-induced oligodendrocyte cell death.

Authors:  V Voccoli; I Tonazzini; G Signore; M Caleo; M Cecchini
Journal:  Cell Death Dis       Date:  2014-11-20       Impact factor: 8.469

10.  2016 update of the PRIDE database and its related tools.

Authors:  Juan Antonio Vizcaíno; Attila Csordas; Noemi del-Toro; José A Dianes; Johannes Griss; Ilias Lavidas; Gerhard Mayer; Yasset Perez-Riverol; Florian Reisinger; Tobias Ternent; Qing-Wei Xu; Rui Wang; Henning Hermjakob
Journal:  Nucleic Acids Res       Date:  2015-11-02       Impact factor: 16.971

View more
  8 in total

Review 1.  Mass spectrometry-based proteomics in neurodegenerative lysosomal storage disorders.

Authors:  Wenping Li; Stephanie M Cologna
Journal:  Mol Omics       Date:  2022-05-11

2.  Isolation and Proteomic Analysis of Mouse Serum Small Extracellular Vesicles for Individual Subject Analysis.

Authors:  Federica Anastasi; Marialaura Dilillo; Davide Pellegrini; Liam A McDonnell
Journal:  Methods Mol Biol       Date:  2022

3.  Human iPSC-based neurodevelopmental models of globoid cell leukodystrophy uncover patient- and cell type-specific disease phenotypes.

Authors:  Elisabeth Mangiameli; Anna Cecchele; Francesco Morena; Francesca Sanvito; Vittoria Matafora; Angela Cattaneo; Lucrezia Della Volpe; Daniela Gnani; Marianna Paulis; Lucia Susani; Sabata Martino; Raffaella Di Micco; Angela Bachi; Angela Gritti
Journal:  Stem Cell Reports       Date:  2021-05-13       Impact factor: 7.765

4.  Automated sample preparation with SP3 for low-input clinical proteomics.

Authors:  Torsten Müller; Mathias Kalxdorf; Rémi Longuespée; Daniel N Kazdal; Albrecht Stenzinger; Jeroen Krijgsveld
Journal:  Mol Syst Biol       Date:  2020-01       Impact factor: 11.429

5.  Proteomics analysis of serum small extracellular vesicles for the longitudinal study of a glioblastoma multiforme mouse model.

Authors:  Federica Anastasi; Francesco Greco; Marialaura Dilillo; Eleonora Vannini; Valentina Cappello; Laura Baroncelli; Mario Costa; Mauro Gemmi; Matteo Caleo; Liam A McDonnell
Journal:  Sci Rep       Date:  2020-11-24       Impact factor: 4.379

Review 6.  The rapidly evolving view of lysosomal storage diseases.

Authors:  Giancarlo Parenti; Diego L Medina; Andrea Ballabio
Journal:  EMBO Mol Med       Date:  2021-01-18       Impact factor: 12.137

7.  Synaptic Vesicles Dynamics in Neocortical Epilepsy.

Authors:  Eleonora Vannini; Laura Restani; Marialaura Dilillo; Liam A McDonnell; Matteo Caleo; Vincenzo Marra
Journal:  Front Cell Neurosci       Date:  2020-12-10       Impact factor: 5.505

8.  Chronic lithium administration in a mouse model for Krabbe disease.

Authors:  Ambra Del Grosso; Gabriele Parlanti; Lucia Angella; Nadia Giordano; Ilaria Tonazzini; Elisa Ottalagana; Sara Carpi; Roberto Maria Pellegrino; Husam B R Alabed; Carla Emiliani; Matteo Caleo; Marco Cecchini
Journal:  JIMD Rep       Date:  2021-11-12
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.