Literature DB >> 30926307

Bioinformatics analysis of evolutionary characteristics and biochemical structure of FGF5 Gene in sheep.

Rui Zhang1, Hongping Wu2, Zhengxing Lian3.   

Abstract

Fibroblast growth factor (FGF) 5 regulates the development and periodicity of hair follicles, which can affect hair traits. Loss-of-function mutations associated with long-hair phenotypes have been described in several mammalian species. Sheep is an important economic animal, however, the evolution characterizations and biological mechanism of oFGF5 (Ovis aries FGF5) gene are still poorly understood. In this study, oFGF5 gene was obtained by resequencing the whole genome of three Dorper sheep and RACE of two Kazakh sheep FGF5. We proposed FGF5 was phylogenetically related to FGF4 family and oFGF5 clearly orthologed to goat FGF5. Six loci were found from the positive selection results of FGF5 and half of them located on signal peptide. The basically similar rates of function-altering substitutions in sheep and goat lineage and the rest of the mammalian lineage of 365 SNPs indicated that the FGF5 gene was quite conservative during evolution. Homology modeling of the oFGF5 suggested that it has a highly conserved FGF superfamily domain containing 10 β-strands. Furthermore, the protein-protein docking analysis revealed that oFGF5 have the potential to form heterodimers with oFGFR1, the predicted interaction interface of FGF5-FGFR1 heterodimer was formed mainly by residues from FGF superfamily domain. Our observations suggested the evolutionary and structural biology features of oFGF5 might be relevant to its function about hair follicle development and modulating hair growth, and we confirmed our speculation by using the FGF5 gene editing sheep produced by CRISPR/Cas9 technology. Published by Elsevier B.V.

Entities:  

Keywords:  CRISPR/Cas9; FGF5; Molecular evolution; Protein–protein interactions; Sheep; Structural characteristics

Mesh:

Substances:

Year:  2019        PMID: 30926307     DOI: 10.1016/j.gene.2019.03.040

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  4 in total

1.  Genome-wide comparative analyses reveal selection signatures underlying adaptation and production in Tibetan and Poll Dorset sheep.

Authors:  Yingyue Zhang; Xianglan Xue; Yue Liu; Adam Abied; Yangyang Ding; Shengguo Zhao; Wenqiang Wang; Liqing Ma; Jijun Guo; Weijun Guan; Yabin Pu; Joram M Mwacharo; Jianlin Han; Yuehui Ma; Qianjun Zhao
Journal:  Sci Rep       Date:  2021-01-28       Impact factor: 4.379

2.  Lef1 and Dlx3 May Facilitate the Maturation of Secondary Hair Follicles in the Skin of Gansu Alpine Merino.

Authors:  Hongxian Sun; Zhaohua He; Qiming Xi; Fangfang Zhao; Jiang Hu; Jiqing Wang; Xiu Liu; Zhidong Zhao; Mingna Li; Yuzhu Luo; Shaobin Li
Journal:  Genes (Basel)       Date:  2022-07-25       Impact factor: 4.141

Review 3.  Genetics of the phenotypic evolution in sheep: a molecular look at diversity-driving genes.

Authors:  Peter Kalds; Shiwei Zhou; Yawei Gao; Bei Cai; Shuhong Huang; Yulin Chen; Xiaolong Wang
Journal:  Genet Sel Evol       Date:  2022-09-09       Impact factor: 5.100

4.  FGF gene family characterization provides insights into its adaptive evolution in Carnivora.

Authors:  Qinguo Wei; Yuehuan Dong; Guolei Sun; Xibao Wang; Xiaoyang Wu; Xiaodong Gao; Weilai Sha; Guang Yang; Honghai Zhang
Journal:  Ecol Evol       Date:  2021-06-29       Impact factor: 2.912

  4 in total

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