Literature DB >> 30925430

Population-level approaches reveal novel aspects of lignin biosynthesis, content, composition and structure.

Gerald A Tuskan1, Wellington Muchero2, Timothy J Tschaplinski2, Arthur J Ragauskas3.   

Abstract

Population-level studies enabled by high-throughput phenotyping have revealed significant variation in lignin characteristics including content, S:G:H ratio, inter-unit linkage distributions, and molecular weights across multiple plant species. Coupled with genome-wide association mapping studies (GWAS) targeted at linking genetic mutations to phenotype, significant progress has been made in associating putative causal mutations to variation in lignin characteristics. Despite this progress, there are few examples, in which these associations have been molecularly validated to provide new insights into the genetic regulation of lignin biosynthesis. Given a recent report of a GWAS-discovered 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase moonlighting as a transcriptional regulator of lignin biosynthesis, the potential to bridge scientific disciplines in order to uncover hidden elements of lignin biosynthesis has been demonstrated, offering a path to alter lignin characteristics via genetic manipulation in order to expedite lignin valorization. To maximize this potential, however, there is a crucial need for (1) broader surveys of naturally varying diverse plant populations and (2) analytical platforms that can resolve subtle properties at fine chemical and biological scales. Published by Elsevier Ltd.

Entities:  

Year:  2019        PMID: 30925430     DOI: 10.1016/j.copbio.2019.02.017

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  4 in total

1.  Combined Transcriptome and Metabolome Analyses Reveal Candidate Genes Involved in Tangor (Citrus reticulata × Citrus sinensis) Fruit Development and Quality Formation.

Authors:  Xiaoyi Bi; Ling Liao; Lijun Deng; Zhenghua Jin; Zehao Huang; Guochao Sun; Bo Xiong; Zhihui Wang
Journal:  Int J Mol Sci       Date:  2022-05-13       Impact factor: 6.208

Review 2.  Recent Advances in the Catalytic Depolymerization of Lignin towards Phenolic Chemicals: A Review.

Authors:  Xudong Liu; Florent P Bouxin; Jiajun Fan; Vitaliy L Budarin; Changwei Hu; James H Clark
Journal:  ChemSusChem       Date:  2020-08-03       Impact factor: 8.928

3.  Accurate determination of genotypic variance of cell wall characteristics of a Populus trichocarpa pedigree using high-throughput pyrolysis-molecular beam mass spectrometry.

Authors:  Anne E Harman-Ware; David Macaya-Sanz; Stephen P DiFazio; Mark F Davis; Chanaka Roshan Abeyratne; Crissa Doeppke; Kathleen Haiby; Gerald A Tuskan; Brian Stanton
Journal:  Biotechnol Biofuels       Date:  2021-03-06       Impact factor: 6.040

4.  Xylem systems genetics analysis reveals a key regulator of lignin biosynthesis in Populus deltoides.

Authors:  Kelly M Balmant; Jerald D Noble; Filipe C Alves; Christopher Dervinis; Daniel Conde; Henry W Schmidt; Ana I Vazquez; William B Barbazuk; Gustavo de Los Campos; Marcio F R Resende; Matias Kirst
Journal:  Genome Res       Date:  2020-08-19       Impact factor: 9.043

  4 in total

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