Literature DB >> 30925045

A trans-Acting Cyclase Offloading Strategy for Nonribosomal Peptide Synthetases.

Divya Thankachan, Asif Fazal, Daniel Francis, Lijiang Song1, Michael E Webb, Ryan F Seipke.   

Abstract

The terminal step in the biosynthesis of nonribosomal peptides is the hydrolytic release and, frequently, macrocyclization of an aminoacyl-S-thioester by an embedded thioesterase. The surugamide biosynthetic pathway is composed of two nonribosomal peptide synthetase (NRPS) assembly lines in which one produces surugamide A, which is a cyclic octapeptide, and the other produces surugamide F, a linear decapeptide. The terminal module of each system lacks an embedded thioesterase, which led us to question how the peptides are released from the assembly line (and cyclized in the case of surugamide A). We characterized a cyclase belonging to the β-lactamase superfamily in vivo, established that it is a trans-acting release factor for both compounds, and verified this functionality in vitro with a thioester mimic of linear surugamide A. Using bioinformatics, we estimate that ∼11% of filamentous Actinobacteria harbor an NRPS system lacking an embedded thioesterase and instead employ a trans-acting cyclase. This study improves the paradigmatic understanding of how nonribosomal peptides are released from the terminal peptidyl carrier protein and adds a new dimension to the synthetic biology toolkit.

Entities:  

Year:  2019        PMID: 30925045     DOI: 10.1021/acschembio.9b00095

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  4 in total

1.  Genome Mining and Metabolomics Uncover a Rare d-Capreomycidine Containing Natural Product and Its Biosynthetic Gene Cluster.

Authors:  James H Tryon; Jennifer C Rote; Li Chen; Matthew T Robey; Marvin M Vega; Wan Cheng Phua; William W Metcalf; Kou-San Ju; Neil L Kelleher; Regan J Thomson
Journal:  ACS Chem Biol       Date:  2020-11-05       Impact factor: 5.100

2.  Synthetic Natural Product Inspired Cyclic Peptides.

Authors:  Matthew A Hostetler; Chloe Smith; Samantha Nelson; Zachary Budimir; Ramya Modi; Ian Woolsey; Autumn Frerk; Braden Baker; Jessica Gantt; Elizabeth I Parkinson
Journal:  ACS Chem Biol       Date:  2021-10-26       Impact factor: 5.100

3.  Genome Mining Coupled with OSMAC-Based Cultivation Reveal Differential Production of Surugamide A by the Marine Sponge Isolate Streptomyces sp. SM17 When Compared to Its Terrestrial Relative S. albidoflavus J1074.

Authors:  Eduardo L Almeida; Navdeep Kaur; Laurence K Jennings; Andres Felipe Carrillo Rincón; Stephen A Jackson; Olivier P Thomas; Alan D W Dobson
Journal:  Microorganisms       Date:  2019-09-26

Review 4.  The Desotamide Family of Antibiotics.

Authors:  Asif Fazal; Michael E Webb; Ryan F Seipke
Journal:  Antibiotics (Basel)       Date:  2020-07-27
  4 in total

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