Literature DB >> 30919488

Impact of RNA-Protein Interaction Modes on Translation Control: The Versatile Multidomain Protein Gemin5.

Rosario Francisco-Velilla1, Embarc-Buh Azman1, Encarnacion Martinez-Salas1.   

Abstract

The fate of cellular RNAs is largely dependent on their structural conformation, which determines the assembly of ribonucleoprotein (RNP) complexes. Consequently, RNA-binding proteins (RBPs) play a pivotal role in the lifespan of RNAs. The advent of highly sensitive in cellulo approaches for studying RNPs reveals the presence of unprecedented RNA-binding domains (RBDs). Likewise, the diversity of the RNA targets associated with a given RBP increases the code of RNA-protein interactions. Increasing evidence highlights the biological relevance of RNA conformation for recognition by specific RBPs and how this mutual interaction affects translation control. In particular, noncanonical RBDs present in proteins such as Gemin5, Roquin-1, Staufen, and eIF3 eventually determine translation of selective targets. Collectively, recent studies on RBPs interacting with RNA in a structure-dependent manner unveil new pathways for gene expression regulation, reinforcing the pivotal role of RNP complexes in genome decoding.
© 2019 WILEY Periodicals, Inc.

Entities:  

Keywords:  Gemin5; IRES-driven translation; RNA-binding proteins; noncanonical RNA-binding domains; translation control

Mesh:

Substances:

Year:  2019        PMID: 30919488     DOI: 10.1002/bies.201800241

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  14 in total

1.  A subset of SMN complex members have a specific role in tissue regeneration via ERBB pathway-mediated proliferation.

Authors:  Wuhong Pei; Lisha Xu; Zelin Chen; Claire C Slevin; Kade P Pettie; Stephen Wincovitch; Shawn M Burgess
Journal:  NPJ Regen Med       Date:  2020-03-25

2.  RNA-protein coevolution study of Gemin5 uncovers the role of the PXSS motif of RBS1 domain for RNA binding.

Authors:  Rosario Francisco-Velilla; Azman Embarc-Buh; Sergio Rangel-Guerrero; Sudipto Basu; Sudip Kundu; Encarnacion Martinez-Salas
Journal:  RNA Biol       Date:  2020-05-31       Impact factor: 4.652

3.  Role of salt-bridging interactions in recognition of viral RNA by arginine-rich peptides.

Authors:  Lev Levintov; Harish Vashisth
Journal:  Biophys J       Date:  2021-10-26       Impact factor: 4.033

4.  Loss of function mutations in GEMIN5 cause a neurodevelopmental disorder.

Authors:  Sukhleen Kour; Deepa S Rajan; Tyler R Fortuna; Eric N Anderson; Caroline Ward; Youngha Lee; Sangmoon Lee; Yong Beom Shin; Jong-Hee Chae; Murim Choi; Karine Siquier; Vincent Cantagrel; Jeanne Amiel; Elliot S Stolerman; Sarah S Barnett; Margot A Cousin; Diana Castro; Kimberly McDonald; Brian Kirmse; Andrea H Nemeth; Dhivyaa Rajasundaram; A Micheil Innes; Danielle Lynch; Patrick Frosk; Abigail Collins; Melissa Gibbons; Michele Yang; Isabelle Desguerre; Nathalie Boddaert; Cyril Gitiaux; Siri Lynne Rydning; Kaja K Selmer; Roser Urreizti; Alberto Garcia-Oguiza; Andrés Nascimento Osorio; Edgard Verdura; Aurora Pujol; Hannah R McCurry; John E Landers; Sameer Agnihotri; E Corina Andriescu; Shade B Moody; Chanika Phornphutkul; Maria J Guillen Sacoto; Amber Begtrup; Henry Houlden; Janbernd Kirschner; David Schorling; Sabine Rudnik-Schöneborn; Tim M Strom; Steffen Leiz; Kali Juliette; Randal Richardson; Ying Yang; Yuehua Zhang; Minghui Wang; Jia Wang; Xiaodong Wang; Konrad Platzer; Sandra Donkervoort; Carsten G Bönnemann; Matias Wagner; Mahmoud Y Issa; Hasnaa M Elbendary; Valentina Stanley; Reza Maroofian; Joseph G Gleeson; Maha S Zaki; Jan Senderek; Udai Bhan Pandey
Journal:  Nat Commun       Date:  2021-05-07       Impact factor: 14.919

Review 5.  Uncovering targets of the Leader protease: Linking RNA-mediated pathways and antiviral defense.

Authors:  Margarita Saiz; Encarnacion Martinez-Salas
Journal:  Wiley Interdiscip Rev RNA       Date:  2021-02-18       Impact factor: 9.957

Review 6.  RNA-Binding Proteins at the Host-Pathogen Interface Targeting Viral Regulatory Elements.

Authors:  Azman Embarc-Buh; Rosario Francisco-Velilla; Encarnacion Martinez-Salas
Journal:  Viruses       Date:  2021-05-21       Impact factor: 5.048

Review 7.  Emerging Roles of Gemin5: From snRNPs Assembly to Translation Control.

Authors:  Encarnacion Martinez-Salas; Azman Embarc-Buh; Rosario Francisco-Velilla
Journal:  Int J Mol Sci       Date:  2020-05-29       Impact factor: 5.923

Review 8.  Hepatitis C Virus Translation Regulation.

Authors:  Michael Niepmann; Gesche K Gerresheim
Journal:  Int J Mol Sci       Date:  2020-03-27       Impact factor: 5.923

9.  Structural basis for the dimerization of Gemin5 and its role in protein recruitment and translation control.

Authors:  María Moreno-Morcillo; Rosario Francisco-Velilla; Azman Embarc-Buh; Javier Fernández-Chamorro; Santiago Ramón-Maiques; Encarnacion Martinez-Salas
Journal:  Nucleic Acids Res       Date:  2020-01-24       Impact factor: 16.971

10.  A subset of SMN complex members have a specific role in tissue regeneration via ERBB pathway-mediated proliferation.

Authors:  Wuhong Pei; Lisha Xu; Zelin Chen; Claire C Slevin; Kade P Pettie; Stephen Wincovitch; Shawn M Burgess
Journal:  NPJ Regen Med       Date:  2020-03-25
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