| Literature DB >> 30909663 |
Mansour Moghimi1, Mohammad Reza Sobhan2, Mohammad Hossein Jarahzadeh3, Majid Morovati-Sharifabad4, Kazem Aghili5, Hossein Ahrar5, Masoud Zare-Shehneh6, Hossein Neamatzadeh6.
Abstract
Background: Some studies have investigated the association of GSTM1, GSTT1, GSTM3, and GSTP1 polymorphisms with susceptibility to osteosarcoma; however, these studies results are inconsistent and inconclusive. In order to drive a more precise estimation, the present case-control study and meta-analysis was performed to investigate association of GSTM1, GSTT1, GSTM3, and GSTP1 polymorphisms with osteosarcoma.Entities:
Keywords: Osteosarcoma; Glutathione-S-Transferase; polymorphism; meta-analysis
Mesh:
Substances:
Year: 2019 PMID: 30909663 PMCID: PMC6825775 DOI: 10.31557/APJCP.2019.20.3.675
Source DB: PubMed Journal: Asian Pac J Cancer Prev ISSN: 1513-7368
Figure 1The study Selection and Inclusion Process
Main Characteristics of Studies on GSTM1 and GSTT1 Included in This Meta-Analysis
| First Author(Year) | Country (Ethnicity) | Genotyping Method | Case/ Control | Cases | Controls | MAFs | ||
|---|---|---|---|---|---|---|---|---|
| Present | Null | Present | Null | |||||
| GSTM1 | ||||||||
| Peters, 2000 | Germany (Caucasian) | PCR-RFLP | 71/178 | 41 | 30 | 85 | 93 | 0.261 |
| Barnette, 2004 | USA (Caucasian) | HTA | 12/236 | 10 | 2 | 143 | 183 | 0.387 |
| Salinas-Souza, 2010 | Brazil (Caucasian) | PCR-RFLP | 80/160 | 45 | 35 | 88 | 72 | 0.225 |
| Lu, 2011 | China (Asian) | TaqMan | 110/226 | 49 | 61 | 122 | 104 | 0.23 |
| Yang, 2012 | China (Asian) | PCR-RFLP | 187/79 | 95 | 92 | 42 | 37 | 0.234 |
| Zhang, 2012 | China (Asian) | TaqMan | 159/75 | 67 | 92 | 39 | 36 | 0.24 |
| Li, 2015 | China (Asian) | Multi-PCR | 52/79 | 36 | 16 | 42 | 37 | 0.234 |
| Qu, 2016 | China (Asian) | RFLP | 153/252 | 88 | 65 | 157 | 95 | 0.188 |
| Present, 2018 | Iran (Asian) | PCR-RFLP | 51/60 | 29 | 22 | 36 | 24 | 0.2 |
| GSTT1 | ||||||||
| Peters, 2000 | Germany (Caucasian) | PCR-RFLP | 76/206 | 55 | 16 | 159 | 47 | 0.114 |
| Barnette, 2004 | USA (Caucasian) | HTA | 12/300 | 10 | 2 | 234 | 66 | 0.11 |
| Salinas-Souza, 2010 | Brazil (Caucasian) | PCR-RFLP | 80/160 | 54 | 26 | 118 | 42 | 0.131 |
| Lu, 2011 | China (Asian) | TaqMan | 110/226 | 40 | 70 | 115 | 111 | 0.244 |
| Yang, 2012 | China (Asian) | PCR-RFLP | 187/79 | 69 | 118 | 32 | 47 | 0.297 |
| Zhang, 2012 | China (Asian) | TaqMan | 159/75 | 54 | 105 | 31 | 44 | 0.293 |
| Qu, 2016 | China (Asian) | PCR-RFLP | 153/252 | 85 | 68 | 145 | 107 | 0.212 |
| Present, 2018 | Iran (Asian) | PCR-RFLP | 51/60 | 27 | 24 | 34 | 26 | 0.216 |
HTA, High throughout assay; RFLP, Restriction fragment length polymorphism; MAF, Minor Allele Frequency.
Characteristics of Studies on GSTM3 and GSTP1 Included in the Meta-Analysis
| First Author | Country (Ethnicity) | Genotyping Technique | Case/Control | Cases | Controls | MAFs | HWE | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Genotypes | Allele | Genotypes | Allele | ||||||||||||
| AA | AB | BB | A | B | AA | AB | BB | A | B | ||||||
| GSTM3 | |||||||||||||||
| Peters 2000 | Germany (Caucasian) | PCR-RFLP | 164/71 | 116 | 47 | 1 | 279 | 49 | 48 | 19 | 4 | 115 | 27 | 0.19 | 0.269 |
| Barnette 2004 | USA (Caucasian) | HTA | 12/236 | 7 | 5 | 0 | 19 | 5 | 224 | 71 | 5 | 519 | 81 | 0.171 | 0.817 |
| Present 2018 | Iran (Asian) | PCR-RFLP | 51/60 | 34 | 16 | 1 | 84 | 18 | 38 | 21 | 1 | 97 | 23 | 0.191 | 0.315 |
| GSTP1 | AA | AB | BB | A | B | AA | AB | BB | A | B | |||||
| Yang 2012 | China (Asian) | PCR-RFLP | 187/71 | 110 | 49 | 28 | 269 | 105 | 51 | 19 | 9 | 121 | 37 | 0.26 | 0.003 |
| Zhang 2012 | China (Asian) | TaqMan | 159/75 | 93 | 40 | 26 | 226 | 92 | 33 | 23 | 19 | 89 | 61 | 0.406 | 0.001 |
| Qu 2016 | China (Asian) | PCR-RFLP | 90/117 | 64 | 71 | 19 | 199 | 109 | 135 | 105 | 12 | 375 | 129 | 0.551 | 0.135 |
| Present 2018 | Iran (Asian) | PCR-RFLP | 51/60 | 32 | 16 | 3 | 80 | 22 | 39 | 19 | 2 | 97 | 23 | 0.192 | 0.864 |
HTA, High throughout assay; RFLP, Restriction fragment length polymorphism; MAF, Minor Allele Frequency; HWE, Hardy–Weinberg Equilibrium
Pooled ORs for the Association of GSTs Polymorphisms with Osteosarcoma Risk
| Subgroup | Genetic Model | Type of Model | Heterogeneity | Odds Ratio (OR) | Publication Bias | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| I2 (%) | PH | OR | 95% CI | ZOR | POR | PBeggs | PEggers | |||
| GSTM1 | ||||||||||
| Overall | Null vs. Present | Random | 66.68 | 0.002 | 0.924 | 0.656-1.301 | -0.453 | 0.651 | 0.047 | 0.008 |
| Asians | Null vs. Present | Fixed | 25.69 | 0.242 | 1.185 | 0.954-1.473 | 1.534 | 0.125 | 0.452 | 0.211 |
| Caucasians | Null vs. Present | Fixed | 82.13 | 0.004 | 0.45 | 0.163-1.245 | -1.538 | 0.124 | 0.296 | 0.152 |
| GSTT1 | ||||||||||
| Overall | Null vs. Present | Fixed | 0 | 0.698 | 1.247 | 1.020-1.524 | 2.155 | 0.031 | 0.536 | 0.368 |
| Asians | Null vs. Present | Fixed | 0 | 0.559 | 1.3 | 1.034-1.635 | 2.242 | 0.025 | 0.806 | 0.991 |
| Caucasians | Null vs. Present | Fixed | 0 | 0.561 | 1.088 | 0.717-1.649 | 0.369 | 0.692 | 1 | 0.579 |
| GSTM3 | ||||||||||
| Overall | B vs. A | Fixed | 0 | 0.648 | 0.856 | 0.584-1.254 | -0.8 | 0.424 | 0.296 | 0.02 |
| BA vs. AA | Fixed | 0 | 0.68 | 1.022 | 0.648-1.513 | 0.094 | 0.925 | 1 | 0.5 | |
| BB vs. AA | Fixed | 42.61 | 0.175 | 0.469 | 0.104-2.108 | -0.988 | 0.323 | 0.296 | 0.026 | |
| BB+BA vs. AA | Fixed | 0 | 0.694 | 0.933 | 0.600-1.452 | -0.305 | 0.76 | 0.296 | 0.275 | |
| BB vs. BA+AA | Fixed | 31.83 | 0.231 | 0.423 | 0.095-1.886 | -1.128 | 0.259 | 0.296 | 0.044 | |
| GSTP1 | ||||||||||
| Overall | B vs. A | Random | 90.07 | ≤0.001 | 8.899 | 2.722-29.094 | 3.617 | ≤0.001 | 0.734 | 0.612 |
| BA vs. AA | Fixed | 38.69 | 0.18 | 1.111 | 0.833-1.483 | 0.718 | 0.473 | 0.308 | 0.37 | |
| BB vs. AA | Random | 77.12 | 0.004 | 1.381 | 0.526-3.627 | 0.654 | 0.513 | 0.734 | 0.763 | |
| BB+BA vs. AA | Fixed | 22.36 | 0.277 | 1.339 | 0.845-2.121 | 1.243 | 0.214 | 0.734 | 0.874 | |
| BB vs. BA+AA | Fixed | 60.02 | 0.057 | 1.117 | 0.735-1.698 | 0.517 | 0.605 | 0.734 | 0.612 | |
Figure 2Forest Plot for Association of GSTM1 Null Genotype (Null vs. Present) with Osteosarcoma Risk in Random-Effects Model
Figure 3Funnel Plot for Publication Bias in the Meta-Analysis of GSTM1 Null Genotype (Null vs. Present) with Osteosarcoma Risk. Blue line without and red line with trim and fill test.