Literature DB >> 30903358

PICS: a platform for planar imaging of curved surfaces of brain and other tissue.

Jessica L Scoggin1, Benjamin S Kemp1, Daniel A Rivera1,2, Teresa A Murray3.   

Abstract

Optical imaging of wholemount tissue samples provides greater understanding of structure-function relationships as the architecture of these specimens is generally well preserved. However, difficulties arise when attempting to stitch together images of multiple regions of larger, oddly shaped specimens. These difficulties include (1) maintaining consistent signal-to-noise ratios when the overlying sample surface is uneven, (2) ensuring sample viability when live samples are required, and (3) stabilizing the specimen in a fixed position in a flowing medium without distorting the tissue sample. To address these problems, we designed a simple and cost-efficient device that can be 3D-printed and machined. The design for the device, named the Platform for Planar Imaging of Curved Surfaces (PICS), consists of a sample holder, or "cap" with gaps for fluid flow and a depression for securing the sample in a fixed position without glue or pins, a basket with two arms that move along an external radius to rotate the sample around a central axis, and a customizable platform designed to fit on a commercially available temperature control system for slice electrophysiology. We tested the system using wholemounts of the murine subventricular zone (SVZ), which has a high degree of curvature, to assess sample viability and image quality through cell movement for over an hour for each sample. Using the PICS system, tissues remained viable throughout the imaging sessions, there were no noticeable decreases in the image SNR across an imaging plane, and there was no noticeable displacement of the specimen due to fluid flow.

Entities:  

Keywords:  3D printing; Cytoarchitecture; Multiphoton imaging; Open source design; Subventricular zone; Wholemount imaging

Mesh:

Year:  2019        PMID: 30903358      PMCID: PMC6565470          DOI: 10.1007/s00429-019-01861-5

Source DB:  PubMed          Journal:  Brain Struct Funct        ISSN: 1863-2653            Impact factor:   3.270


  30 in total

1.  User-friendly semiautomated assembly of accurate image mosaics in microscopy.

Authors:  Philippe Thévenaz; Michael Unser
Journal:  Microsc Res Tech       Date:  2007-02       Impact factor: 2.769

2.  Dynamic features of postnatal subventricular zone cell motility: a two-photon time-lapse study.

Authors:  Sang Chae Nam; Yongsoo Kim; Dilyan Dryanovski; Avery Walker; Gwendolyn Goings; Kevin Woolfrey; Seong Su Kang; Chris Chu; Anjen Chenn; Ferenc Erdelyi; Gabor Szabo; Philip Hockberger; Francis G Szele
Journal:  J Comp Neurol       Date:  2007-11-10       Impact factor: 3.215

3.  Whole mount in situ hybridization detection of mRNAs using short LNA containing DNA oligonucleotide probes.

Authors:  Diana K Darnell; Stacey Stanislaw; Simran Kaur; Parker B Antin
Journal:  RNA       Date:  2010-01-19       Impact factor: 4.942

4.  Cilia organize ependymal planar polarity.

Authors:  Zaman Mirzadeh; Young-Goo Han; Mario Soriano-Navarro; Jose Manuel García-Verdugo; Arturo Alvarez-Buylla
Journal:  J Neurosci       Date:  2010-02-17       Impact factor: 6.167

5.  Tonic activation of GLUK5 kainate receptors decreases neuroblast migration in whole-mounts of the subventricular zone.

Authors:  Jean-Claude Platel; Tristan Heintz; Stephanie Young; Valerie Gordon; Angélique Bordey
Journal:  J Physiol       Date:  2008-06-19       Impact factor: 5.182

6.  Adult SVZ stem cells lie in a vascular niche: a quantitative analysis of niche cell-cell interactions.

Authors:  Qin Shen; Yue Wang; Erzsebet Kokovay; Gang Lin; Shu-Mien Chuang; Susan K Goderie; Badrinath Roysam; Sally Temple
Journal:  Cell Stem Cell       Date:  2008-09-11       Impact factor: 24.633

7.  Migration patterns of subventricular zone cells in adult mice change after cerebral cortex injury.

Authors:  Gwendolyn E Goings; Vibhu Sahni; Francis G Szele
Journal:  Brain Res       Date:  2004-01-23       Impact factor: 3.252

8.  GABA depolarizes neuronal progenitors of the postnatal subventricular zone via GABAA receptor activation.

Authors:  D D Wang; D D Krueger; A Bordey
Journal:  J Physiol       Date:  2003-06-13       Impact factor: 5.182

9.  Globally optimal stitching of tiled 3D microscopic image acquisitions.

Authors:  Stephan Preibisch; Stephan Saalfeld; Pavel Tomancak
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

Review 10.  Neural stem cells and the regulation of adult neurogenesis.

Authors:  Jessica B Lennington; Zhengang Yang; Joanne C Conover
Journal:  Reprod Biol Endocrinol       Date:  2003-11-13       Impact factor: 5.211

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