| Literature DB >> 30899574 |
Laura T Mazzola1, Cassandra Kelly-Cirino1.
Abstract
Crimean-Congo haemorrhagic fever (CCHF) is a widespread tickborne disease that circulates in wild and domestic animal hosts, and causes severe and often fatal haemorrhagic fever in infected humans. Due to the lack of treatment options or vaccines, and a high fatality rate, CCHF virus (CCHFV) is considered a high-priority pathogen according to the WHO R&D Blueprint. Several commercial reverse transcriptase PCR (RT-PCR) and serological diagnostic assays for CCHFV are already available, including febrile agent panels to distinguish CCHFV from other viral haemorrhagic fever agents; however, the majority of international laboratories use inhouse assays. As CCHFV has numerous amplifying animal hosts, a cross-sectoral 'One Health' approach to outbreak prevention is recommended to enhance notifications and enable early warning for genetic and epidemiological shifts in the human, animal and tick populations. However, a lack of guidance for surveillance in animals, harmonisation of case identification and validated serodiagnostic kits for animal testing hinders efforts to strengthen surveillance systems. Additionally, as RT-PCR tests tend to be lineage-specific for regional circulating strains, there is a need for pan-lineage sensitive diagnostics. Adaptation of existing tests to point-of-care molecular diagnostic platforms that can be implemented in clinic or field-based settings would be of value given the potential for CCHFV outbreaks in remote or low-resource areas. Finally, improved access to clinical specimens for validation of diagnostics would help to accelerate development of new tests. These gaps should be addressed by updated target product profiles for CCHFV diagnostics.Entities:
Keywords: CCHF; crimean-congo haemorrhagic fever; in vitro diagnostics; outbreak
Year: 2019 PMID: 30899574 PMCID: PMC6407549 DOI: 10.1136/bmjgh-2018-001114
Source DB: PubMed Journal: BMJ Glob Health ISSN: 2059-7908
Figure 1Geographical distribution of Crimean-Congo haemorrhagic fever (CCHF) (http://www.who.int/emergencies/diseases/crimean-congo-haemorrhagic-fever/en/).
Diagnostics infrastructure comparison
| Test type | Infrastructure requirements | Training requirements | Turnaround time | Inhouse or prototype | Commercial source | Target population |
| Virus isolation, neutralisation | High (BSL-4) | High (advanced lab technician) | 3–7 days | Several | – | Human, animal |
| NAAT reference (including multiplex) | High (BSL-3/4) | High to moderate | 2.5 hours | >10 | >5 | Human, animal, ticks |
| NAAT POC | Moderate/BSL-2 | Moderate | 1–2 hours | 1 | – | Human, ticks, culture |
| ELISA, IFA | High to moderate | Moderate | 3–4 hours | >10 | 6 | Human, animal, culture |
| RDTs | Low | Low | <30 min | – | – | – |
BSL, biosafety containment level; IFA, immunofluorescence assay; NAAT, nucleic acid amplification test; POC, point of care; RDT, rapid diagnostic test.
Inhouse NAAT tests for CCHF: references, reviews, EQA
| Test type | Reference | Review/EQA | Labs using the method (n) | CCHFV target |
| qRT-PCR |
|
| 3 | 24 genomic targets |
| qRT-PCR |
|
| – | 19 strains worldwide |
| qRT-PCR |
|
| 2 | Kosovo Hoti and Drosdov strains |
| qRT-PCR |
|
| – | 18 strains worldwide (updated 26) |
| qRT-PCR |
|
| 3 | – |
| qRT-PCR |
|
| 12 | 17 strains worldwide |
| qRT-PCR |
|
| 2 | – |
| qRT-PCR |
|
| – | 19 Southern African strains |
| qRT-PCR |
|
| – | All known worldwide strains, including the AP92 strain |
| qRT-PCR |
| – | – | – |
| Nested RT-PCR |
|
| 2 | – |
| Nested RT-PCR |
|
| 2 | – |
| Nested RT-PCR |
|
| 1 | – |
| Nested RT-PCR |
| – | – | – |
| Conventional RT-PCR |
|
| 2 | 7 geographically diverse strains |
| Isothermal RPA |
| – | – | 7 geographically diverse strains |
| PCR multiplex |
| – | 2 | – |
| Low density array |
|
| – | Strains worldwide |
| High density array |
|
| – | Nigerian strain |
| Multiplex RT-PCR/NGS |
| – | – | 46 VHF species |
CCHF, Crimean-Congo haemorrhagic fever; CCHFV, CCHF virus; EQA, external quality assessment; NAAT, nucleic acid amplification test; NGS, next-generation sequencing; qRT-PCR, quantitative real-time RT-PCR; RPA, recombinase polymerase amplification; VHF, viral haemorrhagic fever.
Inhouse serological tests for CCHF: references, reviews, EQA
| Test type | Reference source | Review/EQA |
| ELISA (Ag, IgG, IgM) |
|
|
| ELISA (IgG, Ag) |
|
|
| ELISA (IgG) |
|
|
| ELISA (IgG, IgM) |
|
|
| ELISA (IgG, IgM) |
|
|
| ELISA (IgG) |
|
|
| ELISA (IgG) |
|
|
| ELISA (IgM) |
|
|
| ELISA (IgG) |
| – |
| Competitive ELISA |
| |
| Double-Ab ELISA |
| – |
| Immune complex ELISA |
| – |
| Multiplex ELISA |
| (7 viral species) |
| IFA (IgG, IgM) |
|
|
| IFA (IgG) |
|
|
| IFA (IgG) |
|
|
CCHF, Crimean-Congo haemorrhagic fever; EQA, external quality assessment; IFA, immunofluorescence assay.