Literature DB >> 30897525

Microarray-based data mining reveals key genes and potential therapeutic drugs for Cadmium-induced prostate cell malignant transformation.

Ying Xiang1, Liang Zhang2, Yu Huang3, Junjun Ling2, Wenlei Zhuo4.   

Abstract

Increasing evidence showed that Cadmium (Cd) can accumulate in the body and damage cells, resulting in cancerigenesis of the prostate with complex mechanisms. In the present study, we aimed to explore the possible key genes, pathways and therapeutic drugs using bioinformatics methods. Microarray-based data were retrieved and analyzed to screen differentially expressed genes (DEGs) between Cd-treated prostate cells and controls. Then, functions of the DEGs were annotated and hub genes were screened. Next, key genes were selected from the hub genes via validation in a prostate cancer cohort from The Cancer Genome Atlas (TCGA). Afterward, potential drugs were further predicted. Consequently, a gene expression profile, GSE9951, was retrieved. Then, 361 up-regulated and 30 down-regulated DEGs were screened out, which were enriched in various pathways. Among the DEGs, seven hub genes (HSPA5, HSP90AB1, RHOA, HSPD1, MAD2L1, SKP2, and CCT2) were dysregulated in prostate cancer compared to normal controls, and two of them (HSPD1 and CCT2) might influence the prostate cancer prognosis. Lastly, ionomycin was predicted to be a potential agent reversing Cd-induced prostate cell malignant transformation. In summary, the present study provided novel evidence regarding the mechanisms of Cd-induced prostate cell malignant transformation, and identified ionomycin as a potential small molecule against Cd toxicity.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bioinformatics; Cadmium; Differentially expressed genes; Prostate carcinoma; TCGA

Mesh:

Substances:

Year:  2019        PMID: 30897525     DOI: 10.1016/j.etap.2019.03.014

Source DB:  PubMed          Journal:  Environ Toxicol Pharmacol        ISSN: 1382-6689            Impact factor:   4.860


  3 in total

1.  Exosome-Derived miRNAs as Potential Biomarkers for Prostate Bone Metastasis.

Authors:  Zhenquan Lu; Jian Hou; Xiao Li; Jun Zhou; Bingfeng Luo; Songwu Liang; Richard K Lo; Tak Man Wong; Guan-Ming Kuang
Journal:  Int J Gen Med       Date:  2022-06-01

2.  Single-cell sequencing reveals MYC targeting gene MAD2L1 is associated with prostate cancer bone metastasis tumor dormancy.

Authors:  Xing Wang; Jiandi Yu; Junfeng Yan; Kun Peng; Haiyong Zhou
Journal:  BMC Urol       Date:  2022-03-19       Impact factor: 2.264

3.  Chaperonin containing TCP1 as a marker for identification of circulating tumor cells in blood.

Authors:  Amanda Cox; Ana Martini; Heba Ghozlan; Rebecca Moroose; Xiang Zhu; Eunkyung Lee; Amr S Khaled; Louis Barr; Carlos Alemany; Na'im Fanaian; Elizabeth Griffith; Ryan Sause; S A Litherland; Annette R Khaled
Journal:  PLoS One       Date:  2022-06-24       Impact factor: 3.752

  3 in total

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