Literature DB >> 30887305

Comparative transcriptome analysis of salt-sensitive and salt-tolerant maize reveals potential mechanisms to enhance salt resistance.

Mingquan Wang1,2, Yufeng Wang1, Yifei Zhang1, Chunxia Li2, Shichen Gong2, Shuqin Yan2, Guoliang Li2, Guanghui Hu2, Honglei Ren2, Jianfei Yang2, Tao Yu2, Kejun Yang3.   

Abstract

BACKGROUND: Salt stress is a devastating environmental stress that causes plant growth inhibition and yield reduction.
OBJECTIVE: The identification of salt-tolerant genes brings hope for the generation of salinity-tolerant crop plants through molecular breeding.
METHODS: In this study, one salt-sensitive and one salt-tolerant maize inbred line were screened from 242 maize inbred lines. Reactive oxygen species (ROS)-related enzyme activities were detected and salt-responsive comparative transcriptome analysis was performed for control and 220 mM NaCl treated maize leaves.
RESULTS: Salt-tolerant maize inbred line (L87) showed higher ROS-related enzyme (SOD, POD, APX and CAT) activities and accumulated relatively lower levels of ROS under salt stress. Of the total DEGs, 1856 upregulated DEGs were specific to L87, including stress tolerance-related members of the 70kDa family of heat shock proteins (Hsp70s) and aquaporins. The DEGs involved in the abscisic acid (ABA), ethylene, jasmonic acid (JA) and salicylic acid (SA) signal transduction pathways may determine the difference in salt tolerance between the two varieties, especially one central component SnRK2, that positively regulates ABA signaling and was only upregulated in L87. Analysis of DEGs related to ROS scavenging showed that some peroxidase (POD), glutathione S-transferase (GST), catalase (CAT) and superoxide dismutase (SOD) genes specific to L87 probably enhanced its salt tolerance. The analysis of differentially expressed transcription factors (TFs) suggested that WRKY TFs could contribute to the difference in salt tolerance between the two maize lines.
CONCLUSION: Compared with Salt-sensitive maize inbred line (L29), L87 exhibits specific regulatory mechanisms related to salt tolerance, including plant hormone interactions, ROS scavenging and the regulation of TFs. Our study identifies new candidate genes that may regulate maize tolerance to salt stress and provides useful information for breeding maize with high salt resistance.

Entities:  

Keywords:  Differentially expressed genes; Hormone signaling pathways; Maize; RNA-Seq; Salt stress; Transcription factors

Mesh:

Substances:

Year:  2019        PMID: 30887305     DOI: 10.1007/s13258-019-00793-y

Source DB:  PubMed          Journal:  Genes Genomics        ISSN: 1976-9571            Impact factor:   1.839


  69 in total

1.  Three stress-responsive NAC transcription factors from Populus euphratica differentially regulate salt and drought tolerance in transgenic plants.

Authors:  Xin Lu; Xiaofei Zhang; Hui Duan; Conglong Lian; Chao Liu; Weilun Yin; Xinli Xia
Journal:  Physiol Plant       Date:  2017-11-07       Impact factor: 4.500

2.  Alcohol dehydrogenase 1 (ADH1) confers both abiotic and biotic stress resistance in Arabidopsis.

Authors:  Haitao Shi; Wen Liu; Yue Yao; Yunxie Wei; Zhulong Chan
Journal:  Plant Sci       Date:  2017-06-06       Impact factor: 4.729

3.  The B73 maize genome: complexity, diversity, and dynamics.

Authors:  Patrick S Schnable; Doreen Ware; Robert S Fulton; Joshua C Stein; Fusheng Wei; Shiran Pasternak; Chengzhi Liang; Jianwei Zhang; Lucinda Fulton; Tina A Graves; Patrick Minx; Amy Denise Reily; Laura Courtney; Scott S Kruchowski; Chad Tomlinson; Cindy Strong; Kim Delehaunty; Catrina Fronick; Bill Courtney; Susan M Rock; Eddie Belter; Feiyu Du; Kyung Kim; Rachel M Abbott; Marc Cotton; Andy Levy; Pamela Marchetto; Kerri Ochoa; Stephanie M Jackson; Barbara Gillam; Weizu Chen; Le Yan; Jamey Higginbotham; Marco Cardenas; Jason Waligorski; Elizabeth Applebaum; Lindsey Phelps; Jason Falcone; Krishna Kanchi; Thynn Thane; Adam Scimone; Nay Thane; Jessica Henke; Tom Wang; Jessica Ruppert; Neha Shah; Kelsi Rotter; Jennifer Hodges; Elizabeth Ingenthron; Matt Cordes; Sara Kohlberg; Jennifer Sgro; Brandon Delgado; Kelly Mead; Asif Chinwalla; Shawn Leonard; Kevin Crouse; Kristi Collura; Dave Kudrna; Jennifer Currie; Ruifeng He; Angelina Angelova; Shanmugam Rajasekar; Teri Mueller; Rene Lomeli; Gabriel Scara; Ara Ko; Krista Delaney; Marina Wissotski; Georgina Lopez; David Campos; Michele Braidotti; Elizabeth Ashley; Wolfgang Golser; HyeRan Kim; Seunghee Lee; Jinke Lin; Zeljko Dujmic; Woojin Kim; Jayson Talag; Andrea Zuccolo; Chuanzhu Fan; Aswathy Sebastian; Melissa Kramer; Lori Spiegel; Lidia Nascimento; Theresa Zutavern; Beth Miller; Claude Ambroise; Stephanie Muller; Will Spooner; Apurva Narechania; Liya Ren; Sharon Wei; Sunita Kumari; Ben Faga; Michael J Levy; Linda McMahan; Peter Van Buren; Matthew W Vaughn; Kai Ying; Cheng-Ting Yeh; Scott J Emrich; Yi Jia; Ananth Kalyanaraman; An-Ping Hsia; W Brad Barbazuk; Regina S Baucom; Thomas P Brutnell; Nicholas C Carpita; Cristian Chaparro; Jer-Ming Chia; Jean-Marc Deragon; James C Estill; Yan Fu; Jeffrey A Jeddeloh; Yujun Han; Hyeran Lee; Pinghua Li; Damon R Lisch; Sanzhen Liu; Zhijie Liu; Dawn Holligan Nagel; Maureen C McCann; Phillip SanMiguel; Alan M Myers; Dan Nettleton; John Nguyen; Bryan W Penning; Lalit Ponnala; Kevin L Schneider; David C Schwartz; Anupma Sharma; Carol Soderlund; Nathan M Springer; Qi Sun; Hao Wang; Michael Waterman; Richard Westerman; Thomas K Wolfgruber; Lixing Yang; Yeisoo Yu; Lifang Zhang; Shiguo Zhou; Qihui Zhu; Jeffrey L Bennetzen; R Kelly Dawe; Jiming Jiang; Ning Jiang; Gernot G Presting; Susan R Wessler; Srinivas Aluru; Robert A Martienssen; Sandra W Clifton; W Richard McCombie; Rod A Wing; Richard K Wilson
Journal:  Science       Date:  2009-11-20       Impact factor: 47.728

4.  A maize phytochrome-interacting factor 3 improves drought and salt stress tolerance in rice.

Authors:  Yong Gao; Wei Jiang; Yi Dai; Ning Xiao; Changquan Zhang; Hua Li; Yi Lu; Meiqin Wu; Xiaoyi Tao; Dexiang Deng; Jianmin Chen
Journal:  Plant Mol Biol       Date:  2015-01-31       Impact factor: 4.076

5.  Cloning and characterization of a maize bZIP transcription factor, ZmbZIP72, confers drought and salt tolerance in transgenic Arabidopsis.

Authors:  Sheng Ying; Deng-Feng Zhang; Jing Fu; Yun-Su Shi; Yan-Chun Song; Tian-Yu Wang; Yu Li
Journal:  Planta       Date:  2011-08-25       Impact factor: 4.116

6.  Auxin-related gene families in abiotic stress response in Sorghum bicolor.

Authors:  SuiKang Wang; YouHuang Bai; ChenJia Shen; YunRong Wu; SaiNa Zhang; DeAn Jiang; Tom J Guilfoyle; Ming Chen; YanHua Qi
Journal:  Funct Integr Genomics       Date:  2010-05-25       Impact factor: 3.410

Review 7.  ABA signaling in stress-response and seed development.

Authors:  Kazuo Nakashima; Kazuko Yamaguchi-Shinozaki
Journal:  Plant Cell Rep       Date:  2013-03-28       Impact factor: 4.570

8.  Nitric Oxide Mitigates Salt Stress by Regulating Levels of Osmolytes and Antioxidant Enzymes in Chickpea.

Authors:  Parvaiz Ahmad; Arafat A Abdel Latef; Abeer Hashem; Elsayed F Abd Allah; Salih Gucel; Lam-Son P Tran
Journal:  Front Plant Sci       Date:  2016-03-31       Impact factor: 5.753

9.  The Cotton WRKY Gene GhWRKY41 Positively Regulates Salt and Drought Stress Tolerance in Transgenic Nicotiana benthamiana.

Authors:  Xiaoqian Chu; Chen Wang; Xiaobo Chen; Wenjing Lu; Han Li; Xiuling Wang; Lili Hao; Xingqi Guo
Journal:  PLoS One       Date:  2015-11-12       Impact factor: 3.240

10.  Analysis of bZIP Transcription Factor Family and Their Expressions under Salt Stress in Chlamydomonas reinhardtii.

Authors:  Chunli Ji; Xue Mao; Jingyun Hao; Xiaodan Wang; Jinai Xue; Hongli Cui; Runzhi Li
Journal:  Int J Mol Sci       Date:  2018-09-17       Impact factor: 5.923

View more
  7 in total

Review 1.  Salinity stress tolerance and omics approaches: revisiting the progress and achievements in major cereal crops.

Authors:  Pardeep Kumar; Mukesh Choudhary; Tanushree Halder; Nitish Ranjan Prakash; Vishal Singh; Vineeth T V; Seema Sheoran; Ravikiran K T; Ningthaipuilu Longmei; Sujay Rakshit; Kadambot H M Siddique
Journal:  Heredity (Edinb)       Date:  2022-03-05       Impact factor: 3.832

2.  RNA-Seq analysis of Clerodendrum inerme (L.) roots in response to salt stress.

Authors:  Yuping Xiong; Haifeng Yan; Hanzhi Liang; Yueya Zhang; Beiyi Guo; Meiyun Niu; Shuguang Jian; Hai Ren; Xinhua Zhang; Yuan Li; Songjun Zeng; Kunlin Wu; Feng Zheng; Jaime A Teixeira da Silva; Guohua Ma
Journal:  BMC Genomics       Date:  2019-10-10       Impact factor: 3.969

3.  Comparative transcriptome analyses of maize seedling root responses to salt stress.

Authors:  Xiaoxiang Zhang; Peng Liu; Chunyan Qing; Cong Yang; Yaou Shen; Langlang Ma
Journal:  PeerJ       Date:  2021-03-02       Impact factor: 2.984

4.  Integrative Transcriptome and Proteome Analysis Reveals the Absorption and Metabolism of Selenium in Tea Plants [Camellia sinensis (L.) O. Kuntze].

Authors:  Hengze Ren; Xiaoman Li; Lina Guo; Lu Wang; Xinyuan Hao; Jianming Zeng
Journal:  Front Plant Sci       Date:  2022-02-24       Impact factor: 5.753

5.  Maize WRKY114 gene negatively regulates salt-stress tolerance in transgenic rice.

Authors:  Chen Bo; Haowei Chen; Guowei Luo; Wei Li; Xingen Zhang; Qing Ma; Beijiu Cheng; Ronghao Cai
Journal:  Plant Cell Rep       Date:  2019-10-28       Impact factor: 4.570

6.  Transcriptome Changes Induced by Different Potassium Levels in Banana Roots.

Authors:  Yingdui He; Ruimei Li; Fei Lin; Ying Xiong; Lixia Wang; Bizun Wang; Jianchun Guo; Chengxiao Hu
Journal:  Plants (Basel)       Date:  2019-12-19

Review 7.  Advances in Transcriptomics in the Response to Stress in Plants.

Authors:  Xiaojuan Wang; Na Li; Wei Li; Xinlei Gao; Muha Cha; Lijin Qin; Lihong Liu
Journal:  Glob Med Genet       Date:  2020-08-20
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.