Literature DB >> 30882930

Excited-State Dynamics of Thienoguanosine, an Isomorphic Highly Fluorescent Analogue of Guanosine.

Lara Martinez-Fernandez1, Krishna Gavvala2, Rajhans Sharma2, Pascal Didier2, Ludovic Richert2, Javier Segarra Martì3, Mattia Mori4, Yves Mely2, Roberto Improta5.   

Abstract

Thienoguanosine (th G) is an isomorphic analogue of guanosine with promising potentialities as fluorescent DNA label. As a free probe in protic solvents, th G exists in two tautomeric forms, identified as the H1, being the only one observed in nonprotic solvents, and H3 keto-amino tautomers. We herein investigate the photophysics of th G in solvents of different polarity, from water to dioxane, by combining time-resolved fluorescence with PCM/TD-DFT and CASSCF calculations. Fluorescence lifetimes of 14.5-20.5 and 7-13 ns were observed for the H1 and H3 tautomers, respectively, in the tested solvents. In methanol and ethanol, an additional fluorescent decay lifetime (≈3 ns) at the blue emission side (λ≈430 nm) as well as a 0.5 ns component with negative amplitude at the red edge of the spectrum, typical of an excited-state reaction, were observed. Our computational analysis explains the solvent effects observed on the tautomeric equilibrium. The main radiative and nonradiative deactivation routes have been mapped by PCM/TD-DFT calculations in solution and CASSCF in the gas phase. The most easily accessible conical intersection, involving an out-of plane motion of the sulfur atom in the five-membered ring of th G, is separated by a sizeable energy barrier (≥0.4 eV) from the minimum of the spectroscopic state, which explains the large experimental fluorescence quantum yield.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA; TD-DFT calculations; density functional calculations; fluorescence spectroscopy; nucleobases; solvent effects

Year:  2019        PMID: 30882930     DOI: 10.1002/chem.201900677

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  2 in total

1.  What Makes Thienoguanosine an Outstanding Fluorescent DNA Probe?

Authors:  Jagannath Kuchlyan; Lara Martinez-Fernandez; Mattia Mori; Krishna Gavvala; Stefano Ciaco; Christian Boudier; Ludovic Richert; Pascal Didier; Yitzhak Tor; Roberto Improta; Yves Mély
Journal:  J Am Chem Soc       Date:  2020-09-23       Impact factor: 15.419

2.  Deciphering the pH-dependence of ground- and excited-state equilibria of thienoguanine.

Authors:  Pascal Didier; Jagannath Kuchlyan; Lara Martinez-Fernandez; Pauline Gosset; Jérémie Léonard; Yitzhak Tor; Roberto Improta; Yves Mély
Journal:  Phys Chem Chem Phys       Date:  2020-03-25       Impact factor: 3.676

  2 in total

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