Literature DB >> 30877197

ATP-citrate lyase multimerization is required for coenzyme-A substrate binding and catalysis.

Gleb A Bazilevsky1,2, Hayley C Affronti2,3, Xuepeng Wei2,4, Sydney L Campbell1,2,3, Kathryn E Wellen1,2,3, Ronen Marmorstein5,2,4.   

Abstract

ATP-citrate lyase (ACLY) is a major source of nucleocytosolic acetyl-CoA, a fundamental building block of carbon metabolism in eukaryotes. ACLY is aberrantly regulated in many cancers, cardiovascular disease, and metabolic disorders. However, the molecular mechanisms determining ACLY activity and function are unclear. To this end, we investigated the role of the uncharacterized ACLY C-terminal citrate synthase homology domain in the mechanism of acetyl-CoA formation. Using recombinant, purified ACLY and a suite of biochemical and biophysical approaches, including analytical ultracentrifugation, dynamic light scattering, and thermal stability assays, we demonstrated that the C terminus maintains ACLY tetramerization, a conserved and essential quaternary structure in vitro and likely also in vivo Furthermore, we show that the C terminus, only in the context of the full-length enzyme, is necessary for full ACLY binding to CoA. Together, we demonstrate that ACLY forms a homotetramer through the C terminus to facilitate CoA binding and acetyl-CoA production. Our findings highlight a novel and unique role of the C-terminal citrate synthase homology domain in ACLY function and catalysis, adding to the understanding of the molecular basis for acetyl-CoA synthesis by ACLY. This newly discovered means of ACLY regulation has implications for the development of novel ACLY modulators to target acetyl-CoA-dependent cellular processes for potential therapeutic use.
© 2019 Bazilevsky et al.

Entities:  

Keywords:  ATP-citrate lyase; acetyl coenzyme A (acetyl-CoA); citrate synthase; coenzyme A (CoA); enzyme mechanism; metabolism; protein assembly

Mesh:

Substances:

Year:  2019        PMID: 30877197      PMCID: PMC6509486          DOI: 10.1074/jbc.RA118.006685

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

1.  Phosphorylation of recombinant human ATP:citrate lyase by cAMP-dependent protein kinase abolishes homotropic allosteric regulation of the enzyme by citrate and increases the enzyme activity. Allosteric activation of ATP:citrate lyase by phosphorylated sugars.

Authors:  I A Potapova; M R El-Maghrabi; S V Doronin; W B Benjamin
Journal:  Biochemistry       Date:  2000-02-08       Impact factor: 3.162

2.  Boundary analysis in sedimentation transport experiments: a procedure for obtaining sedimentation coefficient distributions using the time derivative of the concentration profile.

Authors:  W F Stafford
Journal:  Anal Biochem       Date:  1992-06       Impact factor: 3.365

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4.  Improved methods for fitting sedimentation coefficient distributions derived by time-derivative techniques.

Authors:  John S Philo
Journal:  Anal Biochem       Date:  2006-05-11       Impact factor: 3.365

Review 5.  Citrate synthase: structure, control, and mechanism.

Authors:  G Wiegand; S J Remington
Journal:  Annu Rev Biophys Biophys Chem       Date:  1986

6.  Acetyl-CoA synthetase from the amitochondriate eukaryote Giardia lamblia belongs to the newly recognized superfamily of acyl-CoA synthetases (Nucleoside diphosphate-forming).

Authors:  L B Sánchez; M Y Galperin; M Müller
Journal:  J Biol Chem       Date:  2000-02-25       Impact factor: 5.157

7.  The identification of ATP-citrate lyase as a protein kinase B (Akt) substrate in primary adipocytes.

Authors:  Daniel C Berwick; Ingeborg Hers; Kate J Heesom; S Kelly Moule; Jeremy M Tavare
Journal:  J Biol Chem       Date:  2002-07-09       Impact factor: 5.157

Review 8.  Understanding the Warburg effect: the metabolic requirements of cell proliferation.

Authors:  Matthew G Vander Heiden; Lewis C Cantley; Craig B Thompson
Journal:  Science       Date:  2009-05-22       Impact factor: 47.728

9.  Differential Scanning Calorimetry - A Method for Assessing the Thermal Stability and Conformation of Protein Antigen.

Authors:  Ibrahim B Durowoju; Kamaljit S Bhandal; Jian Hu; Bruce Carpick; Marina Kirkitadze
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10.  Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8.

Authors:  Eiji Kanamori; Shin-Ichi Kawaguchi; Seiki Kuramitsu; Tsutomu Kouyama; Midori Murakami
Journal:  Biophys Physicobiol       Date:  2015-10-10
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  4 in total

Review 1.  The vital role of ATP citrate lyase in chronic diseases.

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Journal:  J Mol Med (Berl)       Date:  2019-12-19       Impact factor: 4.599

2.  Identification of the active site residues in ATP-citrate lyase's carboxy-terminal portion.

Authors:  Vinh H Nguyen; Noreen Singh; Ana Medina; Isabel Usón; Marie E Fraser
Journal:  Protein Sci       Date:  2019-08-27       Impact factor: 6.725

3.  Earlier Degraded Tapetum1 (EDT1) Encodes an ATP-Citrate Lyase Required for Tapetum Programmed Cell Death.

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Journal:  Plant Physiol       Date:  2019-09-12       Impact factor: 8.340

4.  Application of Coarse-Grained (CG) Models to Explore Conformational Pathway of Large-Scale Protein Machines.

Authors:  Danfeng Shi; Ke An; Honghui Zhang; Peiyi Xu; Chen Bai
Journal:  Entropy (Basel)       Date:  2022-04-29       Impact factor: 2.738

  4 in total

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