Literature DB >> 30877123

Genome-Wide Identification of Fitness Factors in Seawater for Edwardsiella piscicida.

Lifan Wei1, Yanyan Wu1, Guanhua Yang1, Rongjing Xu2, Xiaohong Liu1,3,4, Qin Liu1,3,4, Yuanxing Zhang1,3,4, Yue Ma5,3,4, Qiyao Wang5,3,4.   

Abstract

Marine pathogens are transmitted from one host to another through seawater. Therefore, it is important for marine pathogens to maintain survival or growth in seawater. However, little is known about how marine pathogens adapt to living in seawater environments. Here, transposon insertion sequencing was performed to explore the genetic determinants of Edwardsiella piscicida survival in seawater at 16 and 28°C. Seventy-one mutants with mutations mainly in metabolism-, transportation-, and type III secretion system (T3SS)-related genes showed significantly increased or impaired fitness in 16°C water. In 28°C seawater, 63 genes associated with transcription and translation, as well as energy production and conversion, were essential for optimal survival of the bacterium. In particular, 11 T3SS-linked mutants displayed enhanced fitness in 16°C seawater but not in 28°C seawater. In addition, 13 genes associated with oxidative phosphorylation and 4 genes related to ubiquinone synthesis were identified for survival in 28°C seawater but not in 16°C seawater, which suggests that electron transmission and energy-producing aerobic respiration chain factors are indispensable for E. piscicida to maintain survival in higher-temperature seawater. In conclusion, we defined genes and processes related to metabolism and virulence that operate in E. piscicida to facilitate survival in low- and high-temperature seawater, which may underlie the infection outbreak mechanisms of E. piscicida and facilitate the development of improved vaccines against marine pathogens.IMPORTANCE Edwardsiella piscicida is one of the most important marine pathogens and causes serious edwardsiellosis in farmed fish during the summer-autumn seasonal changes, resulting in enormous losses to aquaculture industries worldwide. Survival and transmission of the pathogen in seawater are critical steps that increase the risk of outbreaks. To investigate the mechanism of survival in seawater for this marine pathogen, we used transposon insertion sequencing analysis to explore the fitness determinants in summer and autumn seawater. Approximately 127 genes linked to metabolism and virulence, as well as other processes, were revealed in E. piscicida to contribute to better adaptations to the seasonal alternations of seawater environments; these genes provide important insights into the infection outbreak mechanisms of E. piscicida and potential improved treatments or vaccines against marine pathogens.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Edwardsiella piscicidazzm321990; T3SS; TIS; oxidative phosphorylation; seawater; temperature; transposon insertion sequencing

Year:  2019        PMID: 30877123      PMCID: PMC6498171          DOI: 10.1128/AEM.00233-19

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  42 in total

1.  Functional reconstitution of bacterial Tat translocation in vitro.

Authors:  T L Yahr; W T Wickner
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

2.  Crystal structure of FadR, a fatty acid-responsive transcription factor with a novel acyl coenzyme A-binding fold.

Authors:  D M van Aalten; C C DiRusso; J Knudsen; R K Wierenga
Journal:  EMBO J       Date:  2000-10-02       Impact factor: 11.598

3.  The Bacterial T6SS Effector EvpP Prevents NLRP3 Inflammasome Activation by Inhibiting the Ca2+-Dependent MAPK-Jnk Pathway.

Authors:  Hao Chen; Dahai Yang; Fajun Han; Jinchao Tan; Lingzhi Zhang; Jingfan Xiao; Yuanxing Zhang; Qin Liu
Journal:  Cell Host Microbe       Date:  2017-01-11       Impact factor: 21.023

4.  Transcriptomic dissection of the horizontally acquired response regulator EsrB reveals its global regulatory roles in the physiological adaptation and activation of T3SS and the cognate effector repertoire in Edwardsiella piscicida during infection toward turbot.

Authors:  Yang Liu; Luyao Zhao; Minjun Yang; Kaiyu Yin; Xiaohui Zhou; Ka Yin Leung; Qin Liu; Yuanxing Zhang; Qiyao Wang
Journal:  Virulence       Date:  2017-04-25       Impact factor: 5.882

5.  Functional characterization of Edwardsiella tarda twin-arginine translocation system and its potential use as biological containment in live attenuated vaccine of marine fish.

Authors:  Yamin Wang; Qiyao Wang; Weizheng Yang; Bing Liu; Yuanxing Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2012-10-11       Impact factor: 4.813

Review 6.  Edwardsiella tarda - virulence mechanisms of an emerging gastroenteritis pathogen.

Authors:  Ka Yin Leung; Bupe A Siame; Byron J Tenkink; Rebecca J Noort; Yu-Keung Mok
Journal:  Microbes Infect       Date:  2011-09-01       Impact factor: 2.700

7.  Coupling of energy to active transport of amino acids in Escherichia coli.

Authors:  R D Simoni; M K Shallenberger
Journal:  Proc Natl Acad Sci U S A       Date:  1972-09       Impact factor: 11.205

8.  Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants.

Authors:  Gemma C Langridge; Minh-Duy Phan; Daniel J Turner; Timothy T Perkins; Leopold Parts; Jana Haase; Ian Charles; Duncan J Maskell; Sarah E Peters; Gordon Dougan; John Wain; Julian Parkhill; A Keith Turner
Journal:  Genome Res       Date:  2009-10-13       Impact factor: 9.043

9.  Edwardsiella comparative phylogenomics reveal the new intra/inter-species taxonomic relationships, virulence evolution and niche adaptation mechanisms.

Authors:  Minjun Yang; Yuanzhi Lv; Jingfan Xiao; Haizhen Wu; Huajun Zheng; Qin Liu; Yuanxing Zhang; Qiyao Wang
Journal:  PLoS One       Date:  2012-05-10       Impact factor: 3.240

Review 10.  The design and analysis of transposon insertion sequencing experiments.

Authors:  Michael C Chao; Sören Abel; Brigid M Davis; Matthew K Waldor
Journal:  Nat Rev Microbiol       Date:  2016-02       Impact factor: 60.633

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  1 in total

1.  Defined Mutant Library Sequencing (DML-Seq) for Identification of Conditional Essential Genes.

Authors:  Shuai Shao; Lifan Wei; Feng Xia; Yuanxing Zhang; And Qiyao Wang
Journal:  Bio Protoc       Date:  2021-03-05
  1 in total

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