| Literature DB >> 30869009 |
S L Hughes1, R A Morbey2, A J Elliot2, S A McEwen1, A L Greer1, I Young3, A Papadopoulos1.
Abstract
Norovirus is a predominant cause of infectious gastroenteritis in countries worldwide [1-5]. It accounts for approximately 50% of acute gastroenteritis (AGE) and >90% of viral gastroenteritis outbreaks [6, 7]. The incubation period ranges between 10 and 48 h and illness duration is generally 1-3 days with self-limiting symptoms; however, this duration is often longer (e.g. 4-6 days) in vulnerable populations such as hospital patients or young children [2, 8]. Symptomatic infection of norovirus presents as acute vomiting, diarrhoea, abdominal cramps and nausea, with severe vomiting and diarrhoea (non-bloody) being most common [2, 5, 9].Entities:
Keywords: Norwalk agent and related viruses; Surveillance system; gastroenteritis; surveillance
Mesh:
Year: 2019 PMID: 30869009 PMCID: PMC6518795 DOI: 10.1017/S0950268818003357
Source DB: PubMed Journal: Epidemiol Infect ISSN: 0950-2688 Impact factor: 2.451
Pseudo-R2 values for all negative binomial regression models
| Model parameters | Model type (stage of lag) | ||||
|---|---|---|---|---|---|
| Age (years) | Telehealth chief complaints | ||||
| 0.1733 | 0.1828 | 0.1852 | |||
| 0–4 | Includes vomiting | 0.1760 | 0.1834 | 0.1841 | |
| 0–4 | Includes vomiting and/or diarrhoea | 0.1663 | 0.1764 | 0.1783 | |
| All | Includes vomiting and/or diarrhoea | 0.1561 | 0.1702 | 0.1748 | |
| ⩾65 | Includes vomiting and/or diarrhoea | 0.0878 | 0.0845 | 0.0831 | |
| ⩾65 | Includes vomiting | 0.0779 | 0.0767 | 0.0802 | |
The highest value in each row is underlined. Bolded text indicates the favoured model deduced from analyses.
Laboratory data used in negative binomial models was regressed at time 0 (t0), and shifted 1 (t1), 2 (t2) and 3 (t3) weeks in the future, separately against telehealth calls.
Vomiting-only calls encompass ‘vomiting’ and ‘vomiting and diarrhoea’ telehealth chief complaints.
Vomiting and diarrhoea calls encompass ‘vomiting’, ‘diarrhoea’ and ‘vomiting and diarrhoea’ telehealth chief complaints.
Model results for norovirus laboratory data predictor variable in all negative binomial regression models
| Model parameters | Model type (stage of lag) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Age (years) | Telehealth chief complaints | Coefficient | 95% CI | Coefficient | 95% CI | Coefficient | 95% CI | Coefficient | 95% CI | ||||
| 0.442 | −0.0010 | (−0.0036) to 0.0016 | 0.964 | 0.000055 | ( | 0.004 | 0.0030 | 0.00097–0.0051 | 0.003 | 0.0028 | 0.00093–0.0047 | ||
| 0–4 | Includes vomiting | 0.630 | 0.00070 | (−0.0021) to 0.0035 | 0.804 | 0.00036 | (−0.0025) to 0.0032 | 0.040 | 0.0027 | 0.00013–0.0052 | 0.039 | 0.0025 | 0.00013–0.0049 |
| 0–4 | Includes vomiting and/or diarrhoea | 0.544 | 0.00080 | (−0.0018) to 0.0034 | 0.306 | 0.0013 | (−0.0012) to 0.0038 | 0.017 | 0.0027 | 0.00047–0.0049 | 0.002 | 0.0031 | 0.0011–0.0051 |
| All | Includes vomiting and/or diarrhoea | 0.738 | 0.00038 | (−0.0019) to 0.0026 | 0.064 | 0.0018 | (−0.00010) to 0.0037 | 0.0034 | 0.0019–0.0050 | 0.0031 | 0.0017–0.0046 | ||
| ⩾65 | Includes vomiting and/or diarrhoea | 0.0082 | 0.0048–0.012 | 0.0082 | 0.0047–0.012 | 0.0096 | 0.0067–0.012 | 0.0081 | 0.0052–0.011 | ||||
| ⩾65 | Includes vomiting | 0.0068 | 0.0042–0.0093 | 0.0065 | 0.0041–0.0090 | 0.0077 | 0.0056–0.0097 | 0.0058 | 0.0036–0.0080 | ||||
CI, confidence interval.
Significant P-values in all rows are underlined. Bolded text indicates the favoured model deduced from analyses.
Laboratory data used in negative binomial models were regressed at time 0 (t0), and shifted 1 (t1), 2 (t2) and 3 (t3) weeks in the future, separately against telehealth calls.
Vomiting-only calls encompass ‘vomiting’ and ‘vomiting and diarrhoea’ telehealth chief complaints.
Vomiting and diarrhoea calls encompass ‘vomiting’, ‘diarrhoea’ and ‘vomiting and diarrhoea’ telehealth chief complaints.
Fig. 1.Weekly telehealth vomiting calls (‘vomiting’ and ‘vomiting and diarrhoea’ chief complaints) and laboratory-positive norovirus submissions, 17 June 2011–30 September 2014.
Fig. 2.Weekly telehealth vomiting calls adjusted to remove long-term trend, with the ‘baseline’ mean number of calls and standard deviations marked, 19 June 2011–29 August 2015.
Telehealth vomiting call volumes and threshold values, and start week for winter norovirus activity; values by standard deviation increment used for thresholds
| Mean + 2 | Mean + 3 | Mean + 4 | ||||
|---|---|---|---|---|---|---|
| Year | Week | # Calls | Week | # Calls | Week | # Calls |
| 2011 | 44 | 462 | 44 | 462 | 44 | 462 |
| 2012 | 42 | 433 | 42 | 433 | 43 | 465 |
| 2013 | 43 | 419 | 44 | 474 | 44 | 474 |
| 2014 | 45 | 444 | 45 | 444 | 45 | 444 |
Calculated threshold values (number of calls).