Literature DB >> 30867246

Complementary Roles for Single-Nucleus and Single-Cell RNA Sequencing in Kidney Disease Research.

Eoin D O'Sullivan1,2, Katie J Mylonas2, Jeremy Hughes1,2, David A Ferenbach3,2.   

Abstract

Entities:  

Keywords:  cell activation; fibrosis; immunology; lymphocytes; macrophages; obstructive nephropathy

Mesh：

Year:  2019        PMID： 30867246      PMCID： PMC6442346          DOI： 10.1681/ASN.2019020112

Source DB:  PubMed          Journal:  J Am Soc Nephrol        ISSN： 1046-6673            Impact factor:   10.121


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  5 in total

1.  Advantages of Single-Nucleus over Single-Cell RNA Sequencing of Adult Kidney: Rare Cell Types and Novel Cell States Revealed in Fibrosis.

Authors:  Haojia Wu; Yuhei Kirita; Erinn L Donnelly; Benjamin D Humphreys
Journal:  J Am Soc Nephrol       Date:  2018-12-03       Impact factor: 10.121

2.  Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease.

Authors:  Jihwan Park; Rojesh Shrestha; Chengxiang Qiu; Ayano Kondo; Shizheng Huang; Max Werth; Mingyao Li; Jonathan Barasch; Katalin Suszták
Journal:  Science       Date:  2018-04-05       Impact factor: 47.728

3.  CD4+ T Lymphocytes, especially Th2 cells, contribute to the progress of renal fibrosis.

Authors:  Lili Liu; Pei Kou; Qiao Zeng; Guangchang Pei; Yueqiang Li; Huifang Liang; Gang Xu; Sheng Chen
Journal:  Am J Nephrol       Date:  2012-10-09       Impact factor: 3.754

4.  Chemokine receptor CCR1 but not CCR5 mediates leukocyte recruitment and subsequent renal fibrosis after unilateral ureteral obstruction.

Authors:  Vaclav Eis; Bruno Luckow; Volker Vielhauer; Jens T Siveke; Yvonne Linde; Stephan Segerer; Guillermo Perez De Lema; Clemens D Cohen; Matthias Kretzler; Matthias Mack; Richard Horuk; Philip M Murphy; Ji-Liang Gao; Kelly L Hudkins; Charles E Alpers; Hermann-Josef Gröne; Detlef Schlöndorff; Hans-Joachim Anders
Journal:  J Am Soc Nephrol       Date:  2004-02       Impact factor: 10.121

5.  Continuous AMD3100 Treatment Worsens Renal Fibrosis through Regulation of Bone Marrow Derived Pro-Angiogenic Cells Homing and T-Cell-Related Inflammation.

Authors:  Juan Yang; Fengming Zhu; Xiaohui Wang; Weiqi Yao; Meng Wang; Guangchang Pei; Zhizhi Hu; Yujiao Guo; Zhi Zhao; Pengge Wang; Jingyi Mou; Jie Sun; Rui Zeng; Gang Xu; Wenhui Liao; Ying Yao
Journal:  PLoS One       Date:  2016-02-22       Impact factor: 3.240
  5 in total
  7 in total

1.  Authors' Reply.

Authors:  Haojia Wu; Yuhei Kirita; Erinn L Donnelly; Benjamin D Humphreys
Journal:  J Am Soc Nephrol       Date:  2019-03-13       Impact factor: 10.121

2.  Development of a 2-dimensional atlas of the human kidney with imaging mass cytometry.

Authors:  Nikhil Singh; Zachary M Avigan; Judith A Kliegel; Brian M Shuch; Ruth R Montgomery; Gilbert W Moeckel; Lloyd G Cantley
Journal:  JCI Insight       Date:  2019-06-20

Review 3.  Applications of single-cell sequencing for the field of otolaryngology: A contemporary review.

Authors:  Madeline P Pyle; Michael Hoa
Journal:  Laryngoscope Investig Otolaryngol       Date:  2020-04-27

4.  Tubular Cell Dropout in Preimplantation Deceased Donor Biopsies as a Predictor of Delayed Graft Function.

Authors:  Zachary M Avigan; Nikhil Singh; Judith A Kliegel; Marlene Weiss; Gilbert W Moeckel; Lloyd G Cantley
Journal:  Transplant Direct       Date:  2021-06-18

5.  Kidney Single-Cell Atlas Reveals Myeloid Heterogeneity in Progression and Regression of Kidney Disease.

Authors:  Bryan R Conway; Eoin D O'Sullivan; Carolynn Cairns; James O'Sullivan; Daniel J Simpson; Angela Salzano; Katie Connor; Peng Ding; Duncan Humphries; Kevin Stewart; Oliver Teenan; Riinu Pius; Neil C Henderson; Cécile Bénézech; Prakash Ramachandran; David Ferenbach; Jeremy Hughes; Tamir Chandra; Laura Denby
Journal:  J Am Soc Nephrol       Date:  2020-09-25       Impact factor: 10.121

Review 6.  Single-cell biology to decode the immune cellular composition of kidney inflammation.

Authors:  Stefan Bonn; Christian F Krebs; Yu Zhao; Ulf Panzer
Journal:  Cell Tissue Res       Date:  2021-06-14       Impact factor: 4.051

7.  Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows.

Authors:  Elena Denisenko; Belinda B Guo; Matthew Jones; Rui Hou; Leanne de Kock; Timo Lassmann; Daniel Poppe; Olivier Clément; Rebecca K Simmons; Ryan Lister; Alistair R R Forrest
Journal:  Genome Biol       Date:  2020-06-02       Impact factor: 13.583
  7 in total

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