Checkpoint inhibition of PD-L1 and CTLA-4 in a child with refractory acute leukemia.

Children with multiple relapsed or refractory leukemia have dismal survival. Research has identified engagement of immune checkpoint receptors (e.g., PD-1, PD-L1 and CTLA-4) as a mechanism for treatment resistance. For adult cancer, inhibitors of PD-1 (nivolumab) and CTLA-4 (ipilimumab) have shown promise with response rates ranging from 7 to 40%. In vitro studies using acute myeloid leukemia cell lines have shown that acute myeloid leukemia blasts may similarly utilize the PD-1/PD-L1 axis to evade an anticancer immune response. We report the first case of a pediatric patient with multiple relapsed/refractory leukemia treated with nivolumab, ipilimumab and 5-azacytidine who tolerated therapy with brief improvement of symptoms.

Relapsed mixed lineage leukemia can be difficult to treat with standard therapies.

Checkpoint blockade with nivolumab and ipilimumab has shown promise in treatment of lymphoma and melanoma with growing evidence in other malignancies, such as acute myeloid leukemia (AML).

Limited data on the efficacy and tolerability of these agents has been reported in pediatrics, although current studies are ongoing.

We report a patient who tolerated combined therapy with 5-azacitidine, nivolumab and later ipilimumab. The patient was able to focus on her quality of life at home with her family during the 6 weeks of epigenetic and checkpoint inhibitor therapy. However, the patient ultimately died from disease progression.

Cytokine evaluation after 5-azacytidine and nivolumab therapy may help identify response to therapy. In this patient, the mixed cytokine response may reflect both activated innate immunity against the AML as well as ongoing AML proliferation.

Further studies are needed to evaluate the efficacy of checkpoint blockade in pediatric AML. Further studies are also needed to determine if cytokine assessment can help determine early response to these therapies.

Outcomes for children with leukemia have improved; however, patients with multiple relapsed or refractory disease continue to have dismal survival [1,2]. In recent years, research has identified engagement of immune checkpoint receptors as a mechanism of tumor evasion [3]. T-cell checkpoint receptors such as CTLA-4 and PD-1 relay inhibitory signals that modulate T-cell activation. Blocking signaling through checkpoint receptors results in increased T-cell activation, with effector T-cell proliferation and increased cytotoxicity toward cancer cells [4]. Inhibitors of PD-1 (nivolumab) and CTLA-4 (ipilimumab) have shown promise for the treatment of advanced melanoma and relapsed Hodgkin's lymphoma with response rates ranging from 7 to 40% [4-6]. In vitro studies have shown that acute myeloid leukemia (AML) may utilize the PD-1/PD-L1 axis to evade an anticancer immune response [7-10]. These findings have prompted development of clinical trials utilizing checkpoint inhibitors for adult malignancies. However, established efficacy in pediatric hematological malignancies remains limited.

Here, we report a case of a pediatric patient with multiple relapsed and refractory acute leukemia who tolerated palliative treatment with 5-azacytidine and two checkpoint inhibitors, nivolumab and ipilimumab, allowing her and her family to focus on her quality of life.

Case presentation

A 4-year-old female presented with persistent fevers and a superficial thigh abscess, unresponsive to outpatient antibiotic treatment. Evaluation revealed an elevated white blood cell count of 84,000 with 74% peripheral blasts and a mediastinal mass. Flow cytometric analysis reported a single blast immunophenotype (CD34+, CD117+, CD38+ and MPO+) with the presence of both T-lymphoid (cytoplasmic CD3+, HLA-DR-) and myelomonocytic (CD7+, CD56+, CD33+ and membrane CD3-) cell markers consistent with mixed phenotype acute leukemia. Based on this phenotype, T-cell acute lymphoblastic leukemia therapy was initially given according to the Children's Oncology Group (COG) protocol AALL0434, but, after 2 days, therapy changed to an AML-directed induction due to concern over a rising white blood cell count of >100,000 (Table 1). At the end of induction with cytarabine, daunorubicin and etoposide, a bone marrow evaluation showed complete remission (<5% blasts) with minimal residual disease (MRD) present (flow cytometry MRD = 0.5%). The patient was switched back to T-ALL therapy to complete a second induction phase (according to COG AALL0434) followed by AALL0434 consolidation with nelarabine and interim maintenance (high-dose methotrexate); however, her MRD persisted, prompting further intensification with cyclophosphamide, etoposide and nelarabine (Table 1). The decision was ultimately made to proceed to allogeneic hematopoietic cell transplantation (HCT), given the inability in achieving an MRD-negative remission (pre-HCT MRD was 0.007%). The patient proceeded to a myeloablative umbilical cord blood HCT with total body irradiation (13.2 Gy), fludarabine (75 mg/m2) and cyclophosphamide (120 mg/kg). Her post-transplant course was complicated by steroid-responsive grade IV gastrointestinal acute graft-versus-host disease, idiopathic pneumonitis and chronic graft-versus-host disease serositis.

 

Chemotherapy course, complications, and disease response after each treatment.

Therapy	Complications	Response
Diagnosis
Induction per COG AALL0434 for T-ALL–Dexamethasone, Vincristine, PEG-asparaginase and Daunorubicin	Rising WBC >100,000	Switched to AAML1031 therapy on Day × 2
Induction I per AAML1031–Etoposide, Daunorubicin, Cytarabine		End of Induction I MRD 0.5%.
Induction following AALL0434–Dexamethasone, Vincristine, and Daunorubicin, PEG- asparaginase	Anaphylaxis to peg-asparaginase and Erwinia	End of Induction MRD 0.065%
Consolidation following AALL0434–Nelarabine, Cyclophosphamide, Cytarabine, steroids		End of Consolidation MRD 0.025%
Interim Maintenance 1–High-dose Methotrexate, Vincristine and 6-mercaptopurine (3 of 5 doses of Methotrexate received)		End of Interim Maintenance 1 MRD 0.03%
–Cyclophosphamide, Etoposide, Nelarabine		End of Cycle MRD 0.025%.
Hematopoietic stem cell transplant		Pre-HCT MRD0.007%
Umbilical Cord Blood HCTMyeloablative conditioning:–TBI (13.2Gy), Fludarabine (75 mg/m2), and Cyclophosphamide (120 mg/kg)	Grade IV gut aGVHDCMV reactivation, BK viuria and viremia, Seizures, transplant associated microangiopathy, Pneumonitis, cGVHD (serositis with pleural pericardial effusions)	MRD <0.001%
Relapse: extramedullary disease and later bone marrow and CNS relapse
–Cyclophosphamide, Etoposide, and Bortezomib		End of Cycle MRD 0.17%
–Nelarabine, skin radiation (scalp - 26Gy, perineum - 21Gy, total skin - 14Gy) with steroids	Disease progression	28% blasts,CNS blasts presentPET - Many diffuse lesions
–Gemtuzumab, Low-dose Cytarabine, and intrathecal Cytarabine	Radiation recall with burns in her perineumSeizure	End of Cycle MRD 0.09%, CNS negative PET single lung nodule
–Venetoclax (120 mg daily for 28-day cycle)	ARF from bilateral ureteral obstruction requiring ureteral stents	End of Cycle7% blasts,CNS positivePET lesions in mediastinum, and pelvis
–Mitoxantrone, High-dose Cytarabine, Gemtuzumab	Pseudomonas InfectionsCheek cellulitisGastritisProlonged Count Recovery	End of Cycle 19% blastsPET negativePeripheral blood blasts present
–Nivolumab (3 mg/kg iv. on days 1 and 14),–Azacytidine (75 mg/m2 iv. daily × 5 days)	Staph epi sepsisHSV reactivationLeft leg pain secondary to marrow infiltration	End of Cycle Persistent disease
–Nivolumab (3 mg/kg iv. on day 1)–Azacytidine (75 mg/m2 iv. daily × 5 days)–Ipilimumab (1 mg/kg iv. on day 3)	Pseudomonas sepsis	Progressive disease

ARF: Acute renal failure; CMV: Cytomegalovirus; CNS: Central nervous system; COG: Children's Oncology Group; GVHD: Graft-versus-host disease; HCT: Hematopoietic cell transplantation; MRD: Minimal residue disease; PET: Positron emission tomography; WBC: White blood cell count.

In 320 days post-HCT, the patient developed an isolated submental nodule that was diagnosed histologically as leukemia cutis (expressing the same myeloid phenotype without CD3 expression from her original diagnosis). Bone marrow aspirate, spinal tap and CT evaluations showed no additional evidence of leukemia. The isolated relapse was completely resected and her parents chose close monitoring without further treatment, instead of reinduction chemotherapy, which was the recommendation of the oncology team. However, over the next few months additional subcutaneous nodules were identified. A PET/CT scan revealed disseminated chloromas. Given this relapse and the known difficulty of cure with traditional chemotherapy, next-generation-sequencing was performed on her original diagnostic bone marrow to identify any potentially targetable mutations. A lone NOTCH mutation was the only lesion identified with a potential therapeutic target. At the time of this relapse, there were no pediatric early phase clinical trials available for her to enroll in. Thus, the patient received multiple reinduction attempts with a variety of chemotherapy salvage combinations, but remission could not be achieved (Table 1).

Given the refractory nature of her disease, which at this time remained as AML without any T-ALL features, and the parent's strong interest in pursuing some form of immunotherapy, we discussed the option of combining checkpoint inhibition (nivolumab) with a DNA methyltransferase inhibitor (5-azacytidine) as was recently reported in adults with refractory AML [11]. After discussion of the potential risks and benefits of this proposed treatment, the family consented to this experimental therapy recommendation as palliative therapy, outside of the context of a clinical trial. Additionally, the parents consented to further research testing performed on their daughter's peripheral blood and bone marrow samples collected during this experimental treatment.

The patient was experiencing significant bone pain at the time prior to starting this palliative therapy for which required hospitalization for aggressive pain management with intravenous narcotics, oral methadone, gabapentin and anxiolytics (lorazepam). The patient thus received her first course of 5-azacytidine (75 mg/m2 iv. daily, days 1–5) and nivolumab (3 mg/kg iv. on days 1 and 14) while in the hospital and tolerated it well without any adverse event (AE). While receiving the combination of 5-azacytidine and nivolumab, her bone pain significantly improved to the point that she was able to be discharged home 5 days later (completing her 5 days of 5-azacytidine) on oral dilaudid, methadone and gabapentin. The patient remained home with her family, coming to the oncology clinic for twice weekly visits, including for her second dose of nivolumab on day 14 of this treatment cycle, and her pain remained well controlled with oral medications alone. At the start of the 5-azacytidine/nivolumab therapy, the patient's peripheral blood had 1% blasts present which slowly increased to 10% by day 14. Unfortunately, she continued to have persistent and rising disease as her peripheral blood blast percentage increased to 34% at day 28 of treatment.

To assess for any response to checkpoint inhibitor therapy, serum obtained 28 days after starting 5-azacytidine/nivolumab was analyzed using the human cytokine/chemokine 65-plex array (Eve Technologies, AB, Canada) that included analysis of the following cytokines/chemokines: CXCL1, CCL1, IFNα2, IFN-γ, IL-1α, IL-1β, IL-1rα, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-12 (p40), IL-12 (p70), IL-13, IL-15, IL-16, IL-17A, IL-18, IL-20, IL-21, IL-23, IL-28a, IL-33, IP-10, LIF, MCP-1, MCP-2, MCP-3, MCP-4, MDC, MIP-1α, MIP-1β, MIP-1δ, PDGF-AA, PDGF-AB/BB, RANTES, SDF-1 α+β, sCD40L, SCF, TARC, TGFα, TNFα, TNFβ, TPO, TRAIL, TSLP and VEGF. The patient's serum sample was compared with normal adult controls, as no pediatric controls were available. We identified a significant increase (as determined by two-way ANOVA) in the concentration of IL-18, FLT3L, G-CSF, CXCL10 and CCL24 in the patient's serum (Figure 1). While not significant, there was also an elevation in proinflammatory cytokines, IL-6 and TNF-a. Of note, a bone marrow sample was not available for immune phenotyping or assessment of PD-1 or CTLA-4 secondary to poor sample quality.

 

Post-treatment serum cytokines.

Serum was obtained after 28 days of treatment with 5-azacytidine and nivolumab. Cytokine concentrations were analyzed by Eve Technologies (AB, Canada) using a Luminex-based platform. Control serum was obtained from normal adult donors.

****p < 0.0001; ***p < 0.001; **p < 0.01 and *p < 0.05.

Despite maintaining good pain control and quality of life, given the patient's persistent disease and the family's desire to continue palliative therapy, a second cycle of 5-azacytidine (75 mg/m2 iv. daily, days 1–5) and nivolumab (3 mg/kg iv. on day 1) was started with the addition of ipilimumab (1 mg/kg iv. on day 3) in hopes of improving the disease response. The combination of nivolumab and ipilimumab was according to the COG Phase I study (ADVL1412, NCT02304458) which reported safety and tolerability combining the CTLA-4 and PD-1 inhibitor (Table 1). The patient tolerated the addition of the CTLA-4 inhibitor (ipilimumab) to 5-azacytidine and nivolumab well without any AEs, including no reports of further bone pain while continuing her oral pain medications (twice daily methadone, gabapentin three-times a day and Dilaudid as needed). During the two cycles of epigenetic/checkpoint inhibitor therapy, she did not have any elevation of liver transaminases (ALT: 28–47 iU/l; AST: 16–40 iU/l) nor significant anemia (range: 7.6–12.0 g/dl) requiring red blood cell transfusions but did require a single platelet transfusion for a platelet count of 10 × 109 per liter (platelet range, 10–110 × 109/l). However, 45 days after starting the first cycle of 5-azacytidine and nivolumab and 11 days after receiving ipilimumab, the patient developed an overwhelming pseudomonas aeruginosa sepsis in the setting of increasing leukemia burden (>65% peripheral blasts; Figure 2) and succumbed to her leukemia.

 

Percent peripheral blasts.

The percent of peripheral blasts present during the 6 weeks of epigenetic and checkpoint inhibitor therapy are reported over time (days of therapy).

Discussion

We report a pediatric patient with relapsed and refractory mixed phenotype acute leukemia treated with a DNA methyltransferase inhibitor (5-azacytidine) and checkpoint inhibitors (nivolumab and ipilimumab). The patient tolerated the palliative regimen very well for 6 weeks while maintaining a reasonably good quality of life, remaining outside of the hospital and with improved pain control. Importantly, there were no AEs attributed to the epigenetic/checkpoint inhibitor therapy. Unfortunately, our patient continued with persistent leukemia despite this regimen. In an attempt to evaluate the response to checkpoint blockade, we analyzed serum cytokine expression, as we were unable to evaluate PD-1 expression on either peripheral blood or bone marrow blasts.

Studies have shown that checkpoint blockade is associated with a proinflammatory immune response with an increased expression of TNF-α, IFN-γ, IL-2, IL-6 and IL-17 and can precipitate autoimmunity [12,13]. After 28 days of treatment with 5-azacytidine and nivolumab, our patient had elevated concentrations of proinflammatory cytokines IL-18, CXCL10, FLT3L and CCL24 compared with normal adult control samples. IL-18 is produced upon activation of intracellular innate immune sensors and is considered tumor-suppressive [14]. CXCL10 is released by human AML cells and promotes T-cell chemotaxis [15]. Recombinant CXCL10 has also been shown to inhibit the proliferation of AML precursors [16]. Both IL-18 and CXCL10, induced by checkpoint blockade, suggest an ongoing anti-AML immune response. Unfortunately, our patient also showed evidence of elevated FLT3L and CCL24. FLT3L acts as a mitogenic growth factor for AML cells [17]. CCL24 regulates a Type-2 CD4 T-cell differentiation [18], which is associated with protumor immunity. Thus, the elevation of FLT3L and CCL24 may also be reflective of pro-AML growth and progressive disease. Although a baseline (prenivolumab treatment) serum sample was unavailable for comparison, it is possible that the elevation of these cytokines is a reflection of both activated innate immunity [14] against the AML as well as ongoing AML proliferation, although this is difficult to determine given the lack of pediatric controls.

In summary, this case demonstrates feasibility of combining 5-azacytidine with a PD-L1 and CTLA-4 antibody in a child with refractory leukemia. There were no AEs associated with this therapy over the 6 weeks of treatment and the treatment allowed for improved symptom control at home, limiting the patient's hospital visits and allowed for an improved quality of life. While the cytokine profile is interesting, the anti-AML efficacy of combined epigenetic and checkpoint blockade cannot be determined from this case. Further research is needed to determine if this strategy can be successful for treating pediatric hematologic malignancies such as AML.