| Literature DB >> 30860022 |
Meghna Phanichkrivalkosil1, Ampai Tanganuchitcharnchai1, Suthatip Jintaworn1, Pacharee Kantipong2, Achara Laongnualpanich2, Wirongrong Chierakul1, Daniel H Paris3,1,4,5, Allen L Richards6,7, Tri Wangrangsimakul5,1, Nicholas P J Day5,1, Stuart D Blacksell5,1.
Abstract
In this diagnostic accuracy study, we evaluated data from 135 febrile patients from Chiang Rai, to determine the optimal optical density (OD) cutoffs for an in-house scrub typhus IgM ELISA. Receiver operating characteristic curves were generated using a panel of reference assays, including an IgM immunofluorescence assay (IFA), PCR, in vitro isolation, presence of an eschar, or a combination of these. Altogether, 33 patients (24.4%) were diagnosed as having scrub typhus. Correlation between positivity by IFA and increasing OD values peaked at a cutoff of 2.0, whereas there was little association between positivity by culture or eschar with increasing ELISA cutoffs-cutoffs of 3.0 and 4.0 were demonstrated to be optimal for the total absorbance of the OD at dilutions 1:100, 1:400, 1:1,600, and 1:6,400, for admission and convalescent samples, respectively. The optimal cutoff at a 1:100 dilution was found to be between 1.85 and 2.22 for admission samples and convalescent-phase samples, respectively. Sensitivities for the cutoffs varied from 57.1% to 90.0% depending on the reference test and sample timing, whereas specificities ranged from 85.2% to 99.0%. We therefore recommend a cutoff of around 2.0, depending on the sensitivity and specificity desired in clinical or epidemiological settings. The results demonstrate the ELISA to be a valuable diagnostic tool, suitable for use in resource-limited endemic regions, especially when used in combination with other diagnostic modalities such as the presence of an eschar.Entities:
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Year: 2019 PMID: 30860022 PMCID: PMC6493932 DOI: 10.4269/ajtmh.18-0675
Source DB: PubMed Journal: Am J Trop Med Hyg ISSN: 0002-9637 Impact factor: 2.345
Summary of available patient data
| Sample timing | Overall | ST positive | |||||
|---|---|---|---|---|---|---|---|
| Median | IQR | Median | IQR | ||||
| Age | Admission | 129 | 42 | 29, 51 | 31 | 43 | 32, 50 |
| Gender | Admission | 134 | 61% males | 33 | 61% males | ||
| Days of fever | Admission | 130 | 5 | 3, 7 | 33 | 5 | 4, 7 |
| Convalescent | 82 | 25 | 22, 32 | 33 | 27 | 21, 32 | |
IQR = interquartile range; ST = scrub typhus.
* Full details unavailable.
Overview of diagnostic indices of the optimal optical density (OD) cutoffs for IgM ELISAs, and patient positivity using the specified cutoff
| Criteria | ELISA | Cutoff OD | Sensitivity | Specificity | Accuracy | AUROCC (95% CI) | ||
|---|---|---|---|---|---|---|---|---|
| + | − | |||||||
| Admission | ||||||||
| PCR | + | 16 | 6 | 1.85 | 72.7 | 94.7 | 91.1 | 0.81 (0.67, 0.95) |
| − | 6 | 107 | ||||||
| Culture | + | 4 | 3 | 2.16 | 57.1 | 88.3 | 83.0 | 0.63 (0.31, 0.94) |
| − | 15 | 113 | ||||||
| IFA adm ≥ 3,200 | + | 18 | 2 | 2.02 | 90.0 | 98.3 | 97.0 | 0.94 (0.84, 1.00) |
| − | 2 | 113 | ||||||
| IFA adm ≥ 3,200 or 4-fold rise ≥ 3,200 conv | + | 20 | 5 | 1.85 | 80.0 | 98.2 | 94.8 | 0.89 (0.78, 1.00) |
| − | 2 | 108 | ||||||
| mSTIC | + | 21 | 12 | 1.85 | 63.6 | 99.0 | 90.4 | 0.77 (0.65, 0.90) |
| − | 1 | 101 | ||||||
| Convalescent | ||||||||
| PCR | + | 17 | 5 | 2.03 | 77.3 | 91.2 | 88.2 | 0.80 (0.66, 0.94) |
| − | 10 | 103 | ||||||
| Culture | + | 5 | 2 | 2.22 | 71.4 | 85.2 | 84.4 | 0.67 (0.36, 0.98) |
| − | 19 | 109 | ||||||
| IFA adm ≥ 3,200 | + | 18 | 2 | 2.03 | 90.0 | 92.2 | 91.9 | 0.92 (0.82, 1.00) |
| − | 9 | 106 | ||||||
| IFA adm ≥ 3,200 or 4-fold rise ≥ 3,200 conv | + | 22 | 3 | 2.03 | 88.0 | 95.5 | 94.1 | 0.90 (0.80, 1.00) |
| − | 5 | 105 | ||||||
| mSTIC | + | 23 | 10 | 2.03 | 69.7 | 96.1 | 89.6 | 0.77 (0.64, 0.90) |
| − | 4 | 98 | ||||||
AUROCC = area under the receiver operator characteristic curve; IFA = immunofluorescence assay; mSTIC = modified scrub typhus infection diagnostic criteria.
Figure 1.Immunofluorescence assay (IFA) titer distribution in admission and convalescent-phase samples of scrub typhus patients.
Figure 2.Overview of admission sample over the range ELISA cutoff optical densities (ODs) plotted for various diagnostic modalities of (▲) PCR; (▪) Culture; (▼) immunofluorescence assay (IFA) adm ≥ 3,200; (♦) IFA adm ≥ 3,200 or 4-fold ≥ 3,200; (●) modified scrub typhus infection diagnostic criteria. Sensitivity (A) and specificity (B) of the ELISA cutoffs, and correlation (C) between reference test positivity and ELISA positivity are shown.
Net total absorbance (NTA) analysis using the sum of the optical density (OD) values with corresponding sensitivity and specificity values
| Sample timing | NTA OD cutoff | Sensitivity (%) | Specificity (%) | AUROCC |
|---|---|---|---|---|
| Admission | 1.0 | 81.8 | 54.9 | 0.68 |
| 2.0 | 66.7 | 90.2 | 0.78 | |
| 3.0 | 66.7 | 99.0 | 0.83 | |
| 4.0 | 63.6 | 100 | 0.82 | |
| Convalescent | 1.0 | 81.8 | 41.2 | 0.62 |
| 2.0 | 72.7 | 73.5 | 0.73 | |
| 3.0 | 72.7 | 90.2 | 0.82 | |
| 4.0 | 72.7 | 96.1 | 0.84 |
AUROCC = area under the receiver operator characteristic curve.
Figure 3.Overview of admission (samples over the range of net total absorbance cutoff optical densities (ODs) plotted for the various diagnostic modalities of (▲) PCR; (▪) Culture; (▼) immunofluorescence assay (IFA) adm ≥ 3,200; (♦) IFA adm ≥ 3,200 or 4-fold ≥ 3,200; (●) modified scrub typhus infection diagnostic criteria. Sensitivity (A) and specificity (B) of the ELISA cutoffs, and correlation (C) between reference test positivity and ELISA positivity are shown.