Literature DB >> 30853170

Comparative transcriptome analysis of skeletal muscle in ADSSL1 myopathy.

Hyung Jun Park1, Ji-Man Hong2, Jung Hwan Lee3, Ha Young Shin2, Seung Min Kim2, Kee Duk Park3, Ji Hyun Lee4, Young-Chul Choi5.   

Abstract

ADSSL1 myopathy was recently identified as the cause of muscular disorders in Korean patients with distal myopathy. We generated transcriptome profiles of muscles from control subjects and patients with ADSSL1 myopathy. In the present study, RNA sequencing was conducted with seven vastus lateralis muscle samples from four patients with ADSSL1 myopathy and three control subjects. The hierarchical clustering result revealed a separation between myopathy and control groups. A total of 1,260 transcripts were significantly differentially expressed (|fold change| ≥ 2, p < 0.05), with 740 upregulated transcripts and 520 downregulated transcripts in myopathy group. Eighteen transcripts that mapped to purine metabolism pathway were significantly differentially expressed between the two groups, with ten downregulated transcripts and eight upregulated transcripts in myopathy group. In particular, three genes involved in purine nucleotide cycle (ADSSL1, ADSL, and AMPD1) were significantly downregulated in myopathy group. Ten transcripts in glycolysis/gluconeogenesis pathway were also significantly differentially expressed. This is the first study on the altered expression of transcripts in muscle tissues from patients with ADSSL1 myopathy. Our results provide new insights into the pathogenesis of ADSSL1 myopathy.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  ADSSL1; Gene expression; Myopathy; Pathomechanism; RNA-Seq; Transcriptome

Mesh:

Substances:

Year:  2018        PMID: 30853170     DOI: 10.1016/j.nmd.2018.11.003

Source DB:  PubMed          Journal:  Neuromuscul Disord        ISSN: 0960-8966            Impact factor:   4.296


  2 in total

1.  Multi-Omics Analysis of Key microRNA-mRNA Metabolic Regulatory Networks in Skeletal Muscle of Obese Rabbits.

Authors:  Yanhong Li; Jie Wang; Mauricio A Elzo; Mingchuan Gan; Tao Tang; Jiahao Shao; Tianfu Lai; Yuan Ma; Xianbo Jia; Songjia Lai
Journal:  Int J Mol Sci       Date:  2021-04-19       Impact factor: 5.923

2.  Antimania-Like Effect of Panax ginseng Regulating the Glutamatergic Neurotransmission in REM-Sleep Deprivation Rats.

Authors:  Kang Hyun Leem; Sang A Kim; Hae Jeong Park
Journal:  Biomed Res Int       Date:  2020-10-17       Impact factor: 3.411

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.