Literature DB >> 30850959

Binding of Pb-Melatonin and Pb-(Melatonin-metabolites) complexes with DMT1 and ZIP8: implications for lead detoxification.

Tayde Villaseñor-Granados1,2, Erik Díaz-Cervantes2,3, Karla J Soto-Arredondo2, Minerva Martínez-Alfaro2, Juvencio Robles2, Marco A García-Revilla4.   

Abstract

We have applied the docking methodology to characterize the binding modes of the divalent metal transporter 1 (DMT1) and the zinc transporter 8 (ZIP8) protein channels with: melatonin, some melatonin metabolites, and a few lead complexes of melatonin and its metabolites, in three different coordination modes (mono-coordinated, bi-coordinated and tri-coordinated). Our results show that bi-coordinated and tri-coordinated lead complexes prefer to bind inside the central region of ZIP8. Moreover, the interaction strength is larger compared with that of the free melatonin and melatonin metabolites. On the other hand, the binding modes with DMT1 of such complexes display lower binding energies, compared with the free melatonin and melatonin metabolites. Our results suggest that ZIP8 plays a major role in the translocation of Pb, bi or tri coordinated, when melatonin metabolites are present. Finally, we have characterized the binding modes responsible for the ZIP8 large affinities, found in bi-coordinated and tri-coordinated lead complexes. Our results show that such interactions are greater, because of an increase of the number of hydrogen bonds, the number and intensity of electrostatic interactions, and the interaction overlay degree in each binding mode. Our results give insight into the importance of the ZIP8 channel on lead transport and a possible elimination mechanism in lead detoxification processes. Graphical abstract .

Entities:  

Keywords:  AFMK; AMK kynuramine cpd; CHMI; DMT-1 transporter; Lead poisoning; Melatonin; Molecular docking simulation; Zinc transporter ZIP8

Mesh:

Substances:

Year:  2019        PMID: 30850959      PMCID: PMC6592991          DOI: 10.1007/s40199-019-00256-5

Source DB:  PubMed          Journal:  Daru        ISSN: 1560-8115            Impact factor:   3.117


  43 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Property distribution of drug-related chemical databases.

Authors:  T I Oprea
Journal:  J Comput Aided Mol Des       Date:  2000-03       Impact factor: 3.686

3.  Generalized Gradient Approximation Made Simple.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

4.  Optimized Slater-type basis sets for the elements 1-118.

Authors:  E Van Lenthe; E J Baerends
Journal:  J Comput Chem       Date:  2003-07-15       Impact factor: 3.376

5.  GEMDOCK: a generic evolutionary method for molecular docking.

Authors:  Jinn-Moon Yang; Chun-Chen Chen
Journal:  Proteins       Date:  2004-05-01

Review 6.  Effect of heavy metals on, and handling by, the kidney.

Authors:  Olivier Barbier; Grégory Jacquillet; Michel Tauc; Marc Cougnon; Philippe Poujeol
Journal:  Nephron Physiol       Date:  2005-02-17

Review 7.  One molecule, many derivatives: a never-ending interaction of melatonin with reactive oxygen and nitrogen species?

Authors:  Dun-Xian Tan; Lucien C Manchester; Maria P Terron; Luis J Flores; Russel J Reiter
Journal:  J Pineal Res       Date:  2007-01       Impact factor: 13.007

8.  Metal chelating and hydrogen peroxide scavenging effects of melatonin.

Authors:  Ilhami Gulcin; Mehmet Emin Buyukokuroglu; O Irfan Kufrevioglu
Journal:  J Pineal Res       Date:  2003-05       Impact factor: 13.007

9.  Zinc uptake by proximal cells isolated from rabbit kidney: effects of cysteine and histidine.

Authors:  B Gachot; M Tauc; L Morat; P Poujeol
Journal:  Pflugers Arch       Date:  1991-12       Impact factor: 3.657

10.  ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins.

Authors:  Markus Wiederstein; Manfred J Sippl
Journal:  Nucleic Acids Res       Date:  2007-05-21       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.