Literature DB >> 30850729

Detectible mosaic truncating PPM1D mutations, age and breast cancer risk.

Mitchell J Machiela1, Timothy A Myers1, Christopher J Lyons1, Roelof Koster1, William D Figg1, Leandro M Colli1, Lea Jessop1, Thomas U Ahearn1, Neal D Freedman1, Montserrat García-Closas1, Stephen J Chanock2.   

Abstract

Mosaic protein truncating variants (PTVs) in the phosphatase, Mg2+/Mn2+dependent 1D (PPM1D) gene in blood-derived DNA have been associated with increased risk of breast cancer. We analyzed PPM1D PTVs in blood from 3817 breast cancer cases and 3058 controls by deep sequencing of a previously defined region in exon 6 of PPM1D. We identified 50 of 6875 (0.73%) participants having a mosaic PPM1D PTV. We observed a higher frequency of mosaic PPM1D PTVs with increasing age (Ptrend = 2.9 × 10-6). We did not observe an overall association between PPM1D PTVs and increased breast cancer risk (OR = 1.51, 95% CI = 0.84-2.71). Evidence for an association was observed in a subset of cases with DNA collected 1-year or more before breast cancer diagnosis (OR = 3.44, 95% CI = 1.62-7.30, P-value = 0.001); however, no significant association was observed for the larger series of cases with DNA collected post diagnosis (OR = 1.01, 95% CI = 0.51-2.01, P-value = 0.98). Our study indicates that the PPM1D PTVs are present at higher rates than previously reported and the frequency of PPM1D PTVs increases with age. We observed limited evidence for an association between mosaic PPM1D PTVs and breast cancer risk, suggesting mosaic PPM1D PTVs in the blood likely do not influence risk of breast cancer.

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Year:  2019        PMID: 30850729      PMCID: PMC8211387          DOI: 10.1038/s10038-019-0589-1

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  24 in total

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Journal:  N Engl J Med       Date:  2014-11-26       Impact factor: 91.245

3.  PPM1D mutations in circulating white blood cells and the risk for ovarian cancer.

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4.  Somatic Mosaic Mutations in PPM1D and TP53 in the Blood of Women With Ovarian Carcinoma.

Authors:  Elizabeth M Swisher; Maria I Harrell; Barbara M Norquist; Tom Walsh; Mark Brady; Ming Lee; Robert Hershberg; Kimberly R Kalli; Heather Lankes; Eric Q Konnick; Colin C Pritchard; Bradley J Monk; John K Chan; Robert Burger; Scott H Kaufmann; Michael J Birrer
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Journal:  Am J Hum Genet       Date:  2015-03-05       Impact factor: 11.025

6.  Age-related mutations associated with clonal hematopoietic expansion and malignancies.

Authors:  Mingchao Xie; Charles Lu; Jiayin Wang; Michael D McLellan; Kimberly J Johnson; Michael C Wendl; Joshua F McMichael; Heather K Schmidt; Venkata Yellapantula; Christopher A Miller; Bradley A Ozenberger; John S Welch; Daniel C Link; Matthew J Walter; Elaine R Mardis; John F Dipersio; Feng Chen; Richard K Wilson; Timothy J Ley; Li Ding
Journal:  Nat Med       Date:  2014-10-19       Impact factor: 53.440

7.  PPM1D Mosaic Truncating Variants in Ovarian Cancer Cases May Be Treatment-Related Somatic Mutations.

Authors:  Paul D P Pharoah; Honglin Song; Ed Dicks; Maria P Intermaggio; Patricia Harrington; Caroline Baynes; Kathryn Alsop; Natalia Bogdanova; Mine S Cicek; Julie M Cunningham; Brooke L Fridley; Aleksandra Gentry-Maharaj; Peter Hillemanns; Shashi Lele; Jenny Lester; Valerie McGuire; Kirsten B Moysich; Samantha Poblete; Weiva Sieh; Lara Sucheston-Campbell; Martin Widschwendter; Alice S Whittemore; Thilo Dörk; Usha Menon; Kunle Odunsi; Ellen L Goode; Beth Y Karlan; David D Bowtell; Simon A Gayther; Susan J Ramus
Journal:  J Natl Cancer Inst       Date:  2016-01-27       Impact factor: 13.506

8.  Cost-efficient high-throughput HLA typing by MiSeq amplicon sequencing.

Authors:  Vinzenz Lange; Irina Böhme; Jan Hofmann; Kathrin Lang; Jürgen Sauter; Bianca Schöne; Patrick Paul; Viviane Albrecht; Johanna M Andreas; Daniel M Baier; Jochen Nething; Ulf Ehninger; Carmen Schwarzelt; Julia Pingel; Gerhard Ehninger; Alexander H Schmidt
Journal:  BMC Genomics       Date:  2014-01-24       Impact factor: 3.969

9.  Mosaic loss of chromosome Y is associated with common variation near TCL1A.

Authors:  Weiyin Zhou; Mitchell J Machiela; Neal D Freedman; Nathaniel Rothman; Nuria Malats; Casey Dagnall; Neil Caporaso; Lauren T Teras; Mia M Gaudet; Susan M Gapstur; Victoria L Stevens; Kevin B Jacobs; Joshua Sampson; Demetrius Albanes; Stephanie Weinstein; Jarmo Virtamo; Sonja Berndt; Robert N Hoover; Amanda Black; Debra Silverman; Jonine Figueroa; Montserrat Garcia-Closas; Francisco X Real; Julie Earl; Gaelle Marenne; Benjamin Rodriguez-Santiago; Margaret Karagas; Alison Johnson; Molly Schwenn; Xifeng Wu; Jian Gu; Yuanqing Ye; Amy Hutchinson; Margaret Tucker; Luis A Perez-Jurado; Michael Dean; Meredith Yeager; Stephen J Chanock
Journal:  Nat Genet       Date:  2016-04-11       Impact factor: 38.330

10.  Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome.

Authors:  Mitchell J Machiela; Weiyin Zhou; Eric Karlins; Joshua N Sampson; Neal D Freedman; Qi Yang; Belynda Hicks; Casey Dagnall; Christopher Hautman; Kevin B Jacobs; Christian C Abnet; Melinda C Aldrich; Christopher Amos; Laufey T Amundadottir; Alan A Arslan; Laura E Beane-Freeman; Sonja I Berndt; Amanda Black; William J Blot; Cathryn H Bock; Paige M Bracci; Louise A Brinton; H Bas Bueno-de-Mesquita; Laurie Burdett; Julie E Buring; Mary A Butler; Federico Canzian; Tania Carreón; Kari G Chaffee; I-Shou Chang; Nilanjan Chatterjee; Chu Chen; Constance Chen; Kexin Chen; Charles C Chung; Linda S Cook; Marta Crous Bou; Michael Cullen; Faith G Davis; Immaculata De Vivo; Ti Ding; Jennifer Doherty; Eric J Duell; Caroline G Epstein; Jin-Hu Fan; Jonine D Figueroa; Joseph F Fraumeni; Christine M Friedenreich; Charles S Fuchs; Steven Gallinger; Yu-Tang Gao; Susan M Gapstur; Montserrat Garcia-Closas; Mia M Gaudet; J Michael Gaziano; Graham G Giles; Elizabeth M Gillanders; Edward L Giovannucci; Lynn Goldin; Alisa M Goldstein; Christopher A Haiman; Goran Hallmans; Susan E Hankinson; Curtis C Harris; Roger Henriksson; Elizabeth A Holly; Yun-Chul Hong; Robert N Hoover; Chao A Hsiung; Nan Hu; Wei Hu; David J Hunter; Amy Hutchinson; Mazda Jenab; Christoffer Johansen; Kay-Tee Khaw; Hee Nam Kim; Yeul Hong Kim; Young Tae Kim; Alison P Klein; Robert Klein; Woon-Puay Koh; Laurence N Kolonel; Charles Kooperberg; Peter Kraft; Vittorio Krogh; Robert C Kurtz; Andrea LaCroix; Qing Lan; Maria Teresa Landi; Loic Le Marchand; Donghui Li; Xiaolin Liang; Linda M Liao; Dongxin Lin; Jianjun Liu; Jolanta Lissowska; Lingeng Lu; Anthony M Magliocco; Nuria Malats; Keitaro Matsuo; Lorna H McNeill; Robert R McWilliams; Beatrice S Melin; Lisa Mirabello; Lee Moore; Sara H Olson; Irene Orlow; Jae Yong Park; Ana Patiño-Garcia; Beata Peplonska; Ulrike Peters; Gloria M Petersen; Loreall Pooler; Jennifer Prescott; Ludmila Prokunina-Olsson; Mark P Purdue; You-Lin Qiao; Preetha Rajaraman; Francisco X Real; Elio Riboli; Harvey A Risch; Benjamin Rodriguez-Santiago; Avima M Ruder; Sharon A Savage; Fredrick Schumacher; Ann G Schwartz; Kendra L Schwartz; Adeline Seow; Veronica Wendy Setiawan; Gianluca Severi; Hongbing Shen; Xin Sheng; Min-Ho Shin; Xiao-Ou Shu; Debra T Silverman; Margaret R Spitz; Victoria L Stevens; Rachael Stolzenberg-Solomon; Daniel Stram; Ze-Zhong Tang; Philip R Taylor; Lauren R Teras; Geoffrey S Tobias; David Van Den Berg; Kala Visvanathan; Sholom Wacholder; Jiu-Cun Wang; Zhaoming Wang; Nicolas Wentzensen; William Wheeler; Emily White; John K Wiencke; Brian M Wolpin; Maria Pik Wong; Chen Wu; Tangchun Wu; Xifeng Wu; Yi-Long Wu; Jay S Wunder; Lucy Xia; Hannah P Yang; Pan-Chyr Yang; Kai Yu; Krista A Zanetti; Anne Zeleniuch-Jacquotte; Wei Zheng; Baosen Zhou; Regina G Ziegler; Luis A Perez-Jurado; Neil E Caporaso; Nathaniel Rothman; Margaret Tucker; Michael C Dean; Meredith Yeager; Stephen J Chanock
Journal:  Nat Commun       Date:  2016-06-13       Impact factor: 14.919

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  2 in total

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Journal:  Nat Biotechnol       Date:  2019-11-04       Impact factor: 54.908

2.  PPM1D in Solid and Hematologic Malignancies: Friend and Foe?

Authors:  Linda Zhang; Joanne I Hsu; Margaret A Goodell
Journal:  Mol Cancer Res       Date:  2022-09-02       Impact factor: 6.333

  2 in total

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