| Literature DB >> 30847299 |
Elisa Boldrin1, Sandro Malacrida2, Enrica Rumiato1, Giorgio Battaglia3, Alberto Ruol4, Alberto Amadori1,4, Daniela Saggioro1.
Abstract
Esophageal cancer (EC) is a very aggressive tumor, and no reliable prognostic markers exist especially for resectable advanced neoplasia. The principal aim of this study was to investigate the association of germline polymorphisms in nucleotide excision repair (NER) pathway genes with the overall survival (OS) of patients with advanced EC. As a second aim, we also studied the association of NER gene variants with response to cisplatin-based chemotherapy. Among the EC patients referred to our Institution between 2004 and 2012, we selected a cohort of 180 patients diagnosed with a clinical tumor stage ranging from IIB and IVA. Patients were genotyped for four NER variants, two in the ERCC1 (rs11615 and rs3212986) and two in the ERCC2/XPD (rs1799793 and rs13181) genes. Kaplan-Meier analyses and Cox proportional hazards model were used to evaluate the associations of the selected variants with OS; association with response to neoadjuvant therapy was investigated using logistic regression. Results showed that the ERCC1 rs3212986 and the ERCC2/XPD rs1799793 were significantly associated with shorter OS. On the contrary, response association analysis displayed that, while rs11615 and rs3212986 in ERCC1 were associated with response, both ERCC2/XPD variants were not. By creating survival prediction models, we showed that the rs3212986 and the rs1799793 have a better predictability of the tumor stage alone. Furthermore, they were able to improve the power of the clinical model (AUC = 0.660 vs. AUC = 0.548, p = 0.004). In conclusion, our results indicate that the ERCC1 rs3212986 and the ERCC2/XPD rs1799793 could be used as surrogate markers for a better stratification of EC patients with advanced resectable tumor.Entities:
Keywords: ERCC1 C8092A; ERCC1 rs3212986; ERCC2/XPD rs1799793; XPD Asp312Asn; esophageal cancer; germline variants; overall survival
Year: 2019 PMID: 30847299 PMCID: PMC6393335 DOI: 10.3389/fonc.2019.00085
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Flowchart of the study.
Clinico-pathological characteristics of EC patients analyzed for association with overall survival.
| Median (IQR) | 63 (56–69) | 1 | |
| (Range) | (25–86) | 0.14 | 1.01 (0.99–1.03) |
| Male | 147 (82) | 1 | |
| Female | 33 (18) | 0.39 | 1.25 (0.75–2.10) |
| II (B) | 40 (22) | 1 | |
| III (A-B-C) | 131 (73) | 0.73 | 1.53 (0.96–2.46) |
| IV (A) | 9 (5) | 0.30 | 1.55 (0.66–3.61) |
| EADC | 90 (50) | 1 | |
| ESCC | 90 (50) | 0.31 | 1.22 (0.84–1.77) |
| Neoadjuvant + surgery | 134 (74) | 1 | |
| Surgery | 46 (26) | 0.88 | 0.97 (0.64–1.48) |
| Median (IQR) | 29.5 (14–62) | - | - |
| (Range) | (4–108) | ||
Cox proportional hazards methods.
Figure 2Kaplan-Meier plots of the association between the ERCC1 rs11615 and rs3212986, and the ERCC2/XPD rs13181 and 1799793 and OS.
Univariate and multivariate Cox proportional methods.
| CC | 97 (54) | 1 | 1 | ||||
| rs3212986 | CA | 66 (37) | 0.70 | 0.92 (0.62–1.38) | >1 | 0.56 | 0.88 (0.59–1.33) |
| AA | 17 (9) | 0.02 | 1.93 (1.09–3.40) | 0.03 | 0.06 | 1.75 (0.98–3.11) | |
| CC+CA | 163 (91) | 1 | 1 | ||||
| AA | 17 (9) | 0.01 | 1.41 (1.08–1.85) | 0.02 | 0.02 | 1.80 (1.06–3.18) | |
| GG | 57 (32) | 1 | 1 | ||||
| rs1799793 | GA | 100 (56) | 0.008 | 1.8 (1.16–2.84) | 0.02 | 0.02 | 1.74 (1.11–2.72) |
| AA | 23 (12) | 0.008 | 2.3 (1.24–4.16) | 0.03 | 0.01 | 2.19 (1.19–4.03) | |
| GG | 57 (32) | 1 | 1 | ||||
| GA+AA | 123 (68) | 0.004 | 1.89 (1.22–2.92) | 0.04 | 0.007 | 1.81 (1.17–2.80) | |
Corrected for histological type, clinical stage, treatment, and age at diagnosis.
Figure 3Receiver operating characteristic (ROC) for predicting patient outcome. The plots represent the curves and the area under the curve (AUC) values of the predictive model of germline variants with clinical stage (A) or with germline variants with other clinical features (histotype, therapy and stage) (B).
Clinical characteristics of EC patients analyzed for the association with neoadjuvant treatment.
| Median (IQR) | 61(55-68) | 1 | |
| (Range) | (25-80) | 0.3 | 0.99 (0.95–1.02) |
| Male | 108 (81) | 1 | |
| Female | 26 (19) | 0.5 | 0.72 (0.29–1.78) |
| II (B) | 20 (15) | 1 | |
| III (A-B-C) | 105 (78) | 0.67 | 1.23 (0.46–3.29) |
| IV (A) | 9 (7) | 0.48 | 1.80 (0.35–9.39) |
| EADC | 63 (47) | 1 | |
| ESCC | 71 (53) | 0.4 | 1.32 (0.65–2.65) |
| CT-RT | 111 (83) | 0.19 | N.A. |
| CT | 23 (17) | ||
| R | 76 (57) | – | – |
| NR | 58 (43) | ||
Logistic Regression.
Association analysis of NER pathway genes variants and response to neoadjuvant therapy.
| TT | 44 (33) | 27 (35) | 17 (29) | 1 | 1 | |||
| (Asn118Asn) | CT | 66 (49) | 40 (53) | 26 (45) | 0.11 | 1.03 (0.47–2.26) | 0.14 | 1.03 (0.47–2.27) |
| rs11615 | CC | 24 (18) | 9 (12) | 15 (26) | 2.65 (0.95–7.38) | 2.59 (0.90–7.28) | ||
| TT | 44 (33) | 27 (35) | 17 (29) | 1 | 1 | |||
| CT+CC | 90 (67) | 49 (65) | 41 (71) | 0.45 | 1.33 (0.64–2.77) | 0.48 | 1.31 (0.62–2.76) | |
| TT+CT | 110 (82) | 67 (88) | 43 (74) | |||||
| CC | 24 (18) | 9 (12) | 15 (26) | |||||
| CC | 69 (51) | 46 (61) | 23 (40) | 1 | 1 | |||
| (C8092A) | CA | 51 (38) | 26 (34) | 25 (43) | 1.92 (0.91–4.04) | 1.80 (0.85–3.83) | ||
| rs3212986 | AA | 14 (11) | 4 (5) | 10 (17) | ||||
| CC | 69 (51) | 46 (61) | 23 (40) | |||||
| CA+AA | 65 (49) | 30 (39) | 35 (60) | |||||
| CC+CA | 120 (89) | 72 (95) | 48 (83) | |||||
| AA | 14 (11) | 4 (5) | 10 (17) | |||||
| AA | 41 (31) | 24 (32) | 17 (29) | 1 | 1 | |||
| (Lys751Gln) | AC | 77 (57) | 44 (58) | 33 (57) | 0.84 | 1.06 (0.49–2.28) | 0.84 | 1.07 (0.49–2.34) |
| rs13181 | CC | 16 (12) | 8 (11) | 8 (14) | 1.41 (0.44–4.51) | 1.42 (0.44–4.59) | ||
| AA | 41 (31) | 24 (32) | 17 (29) | 1 | 1 | |||
| AC+CC | 93 (69) | 52 (68) | 41 (71) | 0.78 | 1.11 (0.53–2.34) | 0.76 | 1.13 (0.53–2.40) | |
| AA+AC | 118 (88) | 68 (89) | 50 (86) | 1 | 1 | |||
| CC | 16 (12) | 8 (11) | 8 (14) | 0.56 | 1.36 (0.48–3.87) | 0.57 | 1.36 (0.47–3.90) | |
| GG | 41 (31) | 28 (37) | 13 (23) | 1 | 1 | |||
| (Asp312Asn) | GA | 77 (57) | 42 (55) | 35 (60) | 0.09 | 1.79 (0.81–3.89) | 0.09 | 1.82 (0.81–4.10) |
| rs1799793 | AA | 16 (12) | 6 (8) | 10 (17) | 3.59 (1.07–12.0) | 3.65 (1.07–12.43) | ||
| GG | 41 (31) | 28 (37) | 13 (23) | 1 | 1 | |||
| GA+AA | 93 (69) | 48 (63) | 45 (77) | 0.07 | 2.02 (0.93–4.38) | 0.07 | 2.05 (0.93–4.51) | |
| GG+GA | 118 (88) | 70 (92) | 48 (83) | 1 | 1 | |||
| AA | 16 (12) | 6 (8) | 10 (17) | 0.1 | 2.43 (0.83–7.13) | 0.10 | 2.43 (0.82–7.23) |
Logistic regression.
Adjuasted for hystotype, stage and age at diagnosis.
statistically significant values are reported in bold.
Figure 4Kaplan-Meier plots of the association of the ERCC2/XPD rs1799793 with OS in the EC patients that underwent to neoadjuvant treatment.