Literature DB >> 30840905

Big GABA II: Water-referenced edited MR spectroscopy at 25 research sites.

Mark Mikkelsen1, Daniel L Rimbault2, Peter B Barker3, Pallab K Bhattacharyya4, Maiken K Brix5, Pieter F Buur6, Kim M Cecil7, Kimberly L Chan8, David Y-T Chen9, Alexander R Craven10, Koen Cuypers11, Michael Dacko12, Niall W Duncan13, Ulrike Dydak14, David A Edmondson14, Gabriele Ende15, Lars Ersland16, Megan A Forbes17, Fei Gao18, Ian Greenhouse19, Ashley D Harris20, Naying He21, Stefanie Heba22, Nigel Hoggard23, Tun-Wei Hsu24, Jacobus F A Jansen25, Alayar Kangarlu26, Thomas Lange12, R Marc Lebel27, Yan Li21, Chien-Yuan E Lin28, Jy-Kang Liou24, Jiing-Feng Lirng24, Feng Liu29, Joanna R Long30, Ruoyun Ma31, Celine Maes32, Marta Moreno-Ortega33, Scott O Murray34, Sean Noah35, Ralph Noeske36, Michael D Noseworthy37, Georg Oeltzschner3, Eric C Porges17, James J Prisciandaro38, Nicolaas A J Puts3, Timothy P L Roberts39, Markus Sack15, Napapon Sailasuta40, Muhammad G Saleh3, Michael-Paul Schallmo41, Nicholas Simard42, Diederick Stoffers6, Stephan P Swinnen43, Martin Tegenthoff22, Peter Truong44, Guangbin Wang18, Iain D Wilkinson23, Hans-Jörg Wittsack45, Adam J Woods17, Hongmin Xu21, Fuhua Yan21, Chencheng Zhang46, Vadim Zipunnikov47, Helge J Zöllner48, Richard A E Edden3.   

Abstract

Accurate and reliable quantification of brain metabolites measured in vivo using 1H magnetic resonance spectroscopy (MRS) is a topic of continued interest. Aside from differences in the basic approach to quantification, the quantification of metabolite data acquired at different sites and on different platforms poses an additional methodological challenge. In this study, spectrally edited γ-aminobutyric acid (GABA) MRS data were analyzed and GABA levels were quantified relative to an internal tissue water reference. Data from 284 volunteers scanned across 25 research sites were collected using GABA+ (GABA + co-edited macromolecules (MM)) and MM-suppressed GABA editing. The unsuppressed water signal from the volume of interest was acquired for concentration referencing. Whole-brain T1-weighted structural images were acquired and segmented to determine gray matter, white matter and cerebrospinal fluid voxel tissue fractions. Water-referenced GABA measurements were fully corrected for tissue-dependent signal relaxation and water visibility effects. The cohort-wide coefficient of variation was 17% for the GABA + data and 29% for the MM-suppressed GABA data. The mean within-site coefficient of variation was 10% for the GABA + data and 19% for the MM-suppressed GABA data. Vendor differences contributed 53% to the total variance in the GABA + data, while the remaining variance was attributed to site- (11%) and participant-level (36%) effects. For the MM-suppressed data, 54% of the variance was attributed to site differences, while the remaining 46% was attributed to participant differences. Results from an exploratory analysis suggested that the vendor differences were related to the unsuppressed water signal acquisition. Discounting the observed vendor-specific effects, water-referenced GABA measurements exhibit similar levels of variance to creatine-referenced GABA measurements. It is concluded that quantification using internal tissue water referencing is a viable and reliable method for the quantification of in vivo GABA levels.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Editing; GABA; MEGA-PRESS; MRS; Quantification; Tissue correction

Mesh:

Substances:

Year:  2019        PMID: 30840905      PMCID: PMC6818968          DOI: 10.1016/j.neuroimage.2019.02.059

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  32 in total

1.  Reduced in vivo visual cortex GABA in schizophrenia, a replication in a recent onset sample.

Authors:  Jong H Yoon; Richard J Maddock; Edward DongBo Cui; Michael J Minzenberg; Tara A Niendam; Tyler Lesh; Marjorie Solomon; J Daniel Ragland; Cameron Carter
Journal:  Schizophr Res       Date:  2019-11-06       Impact factor: 4.939

2.  Osprey: Open-source processing, reconstruction & estimation of magnetic resonance spectroscopy data.

Authors:  Georg Oeltzschner; Helge J Zöllner; Steve C N Hui; Mark Mikkelsen; Muhammad G Saleh; Sofie Tapper; Richard A E Edden
Journal:  J Neurosci Methods       Date:  2020-06-27       Impact factor: 2.390

3.  Concentrations of Cortical GABA and Glutamate in Young Adults With Autism Spectrum Disorder.

Authors:  Tamar Kolodny; Michael-Paul Schallmo; Jennifer Gerdts; Richard A E Edden; Raphael A Bernier; Scott O Murray
Journal:  Autism Res       Date:  2020-04-16       Impact factor: 5.216

4.  Comparison of Multivendor Single-Voxel MR Spectroscopy Data Acquired in Healthy Brain at 26 Sites.

Authors:  Michal Považan; Mark Mikkelsen; Adam Berrington; Pallab K Bhattacharyya; Maiken K Brix; Pieter F Buur; Kim M Cecil; Kimberly L Chan; David Y T Chen; Alexander R Craven; Koen Cuypers; Michael Dacko; Niall W Duncan; Ulrike Dydak; David A Edmondson; Gabriele Ende; Lars Ersland; Megan A Forbes; Fei Gao; Ian Greenhouse; Ashley D Harris; Naying He; Stefanie Heba; Nigel Hoggard; Tun-Wei Hsu; Jacobus F A Jansen; Alayar Kangarlu; Thomas Lange; R Marc Lebel; Yan Li; Chien-Yuan E Lin; Jy-Kang Liou; Jiing-Feng Lirng; Feng Liu; Joanna R Long; Ruoyun Ma; Celine Maes; Marta Moreno-Ortega; Scott O Murray; Sean Noah; Ralph Noeske; Michael D Noseworthy; Georg Oeltzschner; Eric C Porges; James J Prisciandaro; Nicolaas A J Puts; Timothy P L Roberts; Markus Sack; Napapon Sailasuta; Muhammad G Saleh; Michael-Paul Schallmo; Nicholas Simard; Diederick Stoffers; Stephan P Swinnen; Martin Tegenthoff; Peter Truong; Guangbin Wang; Iain D Wilkinson; Hans-Jörg Wittsack; Adam J Woods; Hongmin Xu; Fuhua Yan; Chencheng Zhang; Vadim Zipunnikov; Helge J Zöllner; Richard A E Edden; Peter B Barker
Journal:  Radiology       Date:  2020-02-11       Impact factor: 11.105

5.  In silico GABA+ MEGA-PRESS: Effects of signal-to-noise ratio and linewidth on modeling the 3 ppm GABA+ resonance.

Authors:  Helge Jörn Zöllner; Georg Oeltzschner; Alfons Schnitzler; Hans-Jörg Wittsack
Journal:  NMR Biomed       Date:  2020-09-28       Impact factor: 4.044

6.  Spectral editing in 1 H magnetic resonance spectroscopy: Experts' consensus recommendations.

Authors:  In-Young Choi; Ovidiu C Andronesi; Peter Barker; Wolfgang Bogner; Richard A E Edden; Lana G Kaiser; Phil Lee; Małgorzata Marjańska; Melissa Terpstra; Robin A de Graaf
Journal:  NMR Biomed       Date:  2020-09-18       Impact factor: 4.044

7.  MEGA-PRESS of GABA+: Influences of acquisition parameters.

Authors:  Dinesh K Deelchand; Małgorzata Marjańska; Pierre-Gilles Henry; Melissa Terpstra
Journal:  NMR Biomed       Date:  2019-10-28       Impact factor: 4.044

8.  Repeatability and reliability of GABA measurements with magnetic resonance spectroscopy in healthy young adults.

Authors:  Jessica M Duda; Amelia D Moser; Chun S Zuo; Fei Du; Xi Chen; Sarah Perlo; Christine E Richards; Nara Nascimento; Maria Ironside; David J Crowley; Laura M Holsen; Madhusmita Misra; James I Hudson; Jill M Goldstein; Diego A Pizzagalli
Journal:  Magn Reson Med       Date:  2020-11-20       Impact factor: 4.668

9.  Frequency and phase correction of J-difference edited MR spectra using deep learning.

Authors:  Sofie Tapper; Mark Mikkelsen; Blake E Dewey; Helge J Zöllner; Steve C N Hui; Georg Oeltzschner; Richard A E Edden
Journal:  Magn Reson Med       Date:  2020-11-18       Impact factor: 4.668

10.  Increased GABA+ in People With Migraine, Headache, and Pain Conditions- A Potential Marker of Pain.

Authors:  Aimie L Peek; Andrew M Leaver; Sheryl Foster; Georg Oeltzschner; Nicolaas A Puts; Graham Galloway; Michele Sterling; Karl Ng; Kathryn Refshauge; Maria-Eliza R Aguila; Trudy Rebbeck
Journal:  J Pain       Date:  2021-06-25       Impact factor: 5.820

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