| Literature DB >> 30837870 |
Ellie H Jhun1, Nilanjana Sadhu1, Xiaoyu Hu1, Yingwei Yao2,3, Ying He1,4, Diana J Wilkie2,3, Robert E Molokie1,4,5,6, Zaijie Jim Wang1,4.
Abstract
Pain in sickle cell disease (SCD) is severe, variable, and inadequately comprehended. The β2-adrenergic receptor (ADRB2) is critical in mediating neurotransmitter response in the sympathetic nervous system. In this association study, we examined 16 single nucleotide polymorphisms (SNPs) covering 5'-UTR and coding regions of ADRB2 for pain variability in SCD. Subjects recorded their non-crisis, baseline pain experience on a computerized tool from which we obtained chronic pain measurement score- composite pain index (CPI). Regression models yielded significant associations between chronic pain and seven SNPs. Non-synonymous SNP rs1042713 A allele (Arg16) caused a 5.73-fold decrease in CPI (p = 0.002). Allele A of rs12654778 and T of rs17778257 reduced CPI by a fold of 4.52 (p = 0.019), and 4.39 (p = 0.032), respectively. Whereas, in the 5' UTR, allele C of rs1042711, G of rs11168070, C of rs11959427, and C of rs1801704 increased CPI by a fold of 10.86 (p = 0.00049), 5.99 (p = 0.016), 5.69 (p = 0.023), and 5.26 (p = 0.031), respectively. Together, these SNPs accounted for 2-15% of CPI variance after adjusting for covariates. Moreover, these SNPs were in high linkage disequilibrium (LD) showing three LD blocks in our cohort. A 10-marker haplotype increased CPI by 11.5-fold (p = 0.000407). Thus, ADRB2 polymorphisms might contribute to chronic pain severity and heterogeneity in SCD.Entities:
Keywords: beta2-adrenergic receptor; chronic pain; haplotype; sickle cell disease; single nucleotide polymorphism
Year: 2019 PMID: 30837870 PMCID: PMC6390066 DOI: 10.3389/fphar.2019.00084
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.810
Patient Demographics (N = 136).
| Age | Mean ± SD | 34.0 ± 11.7 |
|---|---|---|
| Minimum | 15 | |
| Maximum | 70 | |
| Sex, | Female | 89 (65) |
| Male | 47 (35) | |
| Ethnicity, | African American | 132 (97) |
| Hispanic | 3 (2) | |
| Caucasian | 1 (1) | |
| Sickle cell type∗, | SCD-SS | 105 (77) |
| SCD-SC | 15 (11) | |
| SCD-Sβ+ | 8 (6) | |
| SCD-Sβ° | 7 (5) | |
| SCD-Sα | 1 (1) | |
| CPI | Mean ± SD | 40.4 ± 13.5 |
| Minimum | 14.8 | |
| Maximum | 86.5 | |
| Utilization | Mean ± SD | 4.4 ± 5.2 |
| Median | 3 | |
| Lower quartile–upper quartile | 1–5 | |
| Minimum | 0 | |
| Maximum | 38 | |
| Utilization groups, | Zero (0) | 19 (14) |
| Low (1–3) | 60 (44) | |
| High (4–38) | 57 (42) | |
Allele and genotype frequencies.
| dbSNP ID | Chromosome position∗ | Allele, | Genotype, | |||
|---|---|---|---|---|---|---|
| Major | Minor | Major homozygote | Heterozygote | Minor homozygote | ||
| 11958940 | 148821922 | T, 127 (56.2) | A, 99 (43.8) | 35 (31.0) | 57 (50.4) | 21 (18.6) |
| 1432622 | 148824199 | C, 129 (57.1) | T, 97 (42.9) | 36 (31.9) | 57 (50.4) | 20 (17.7) |
| 17778257 | 148825014 | A, 185 (77.1) | T, 55 (22.9) | 73 (60.8) | 39 (32.5) | 8 (6.7) |
| 2895795 | 148825403 | T, 167 (67.9) | A, 79 (32.1) | 59 (48.0) | 49 (39.8) | 15 (12.2) |
| 2400707 | 148825489 | G, 128 (56.1) | A, 100 (43.9) | 36 (31.6) | 56 (49.1) | 22 (19.3) |
| 2053044 | 148825809 | G, 153 (56.7) | A, 117 (43.3) | 44 (32.6) | 65 (48.1) | 26 (19.3) |
| 12654778 | 148826178 | G, 204 (76.1) | A, 64 (23.9) | 78 (58.2) | 48 (35.8) | 8 (6.0) |
| 11168070 | 148826364 | C, 222 (82.8) | G, 46 (17.2) | 90 (67.2) | 42 (31.3) | 2 (1.5) |
| 11959427 | 148826465 | T, 217 (82.8) | C, 45 (17.2) | 88 (67.2) | 41 (31.3) | 2 (1.5) |
| 1042711 | 148826785 | T, 251 (92.3) | C, 21 (7.7) | 117 (86.0) | 17 (12.5) | 2 (1.5) |
| 1801704 | 148826812 | T, 217 (82.2) | C, 47 (17.8) | 87 (65.9) | 43 (32.6) | 2 (1.5) |
| 1042713 | 148826877 | G (Gly), 116 (50.9) | A (Arg), 112 (49.1) | 29 (25.4) | 58 (50.9) | 27 (23.7) |
| 1042717 | 148827083 | G (Leu), 151 (66.8) | A (Leu), 75 (33.2) | 54 (47.8) | 43 (38.1) | 16 (14.2) |
| 1042718 | 148827354 | C (Arg), 178 (67.9) | A (Arg), 84 (32.1) | 64 (48.9) | 50 (38.2) | 17 (13.0) |
| 1042719 | 148827884 | G (Gly), 165 (66.5) | C (Gly), 83 (33.5) | 57 (46.0) | 51 (41.1) | 16 (12.9) |
| 1042720 | 148828070 | A (Leu), 147 (54.0) | G (Leu), 125 (46.0) | 42 (30.9) | 63 (46.3) | 31 (22.8) |
Multiple linear regression models evaluating the effects of ADRB2 SNPs on CPI.
| dbSNP ID | Model | B (95% CI)∗ | Adj. Rχ† | |
|---|---|---|---|---|
| 11958940 | Add | 3.00 (–0.67, 6.68) | 0.11 | 0.09 |
| Rec | 4.82 (–1.83, 11.47) | 0.15 | 0.09 | |
| Dom | 3.37 (–2.13, 8.86) | 0.23 | 0.08 | |
| 1432622 | Add | 3.14 (–0.58, 6.86) | 0.10 | 0.09 |
| Rec | 4.41 (–2.41, 11.22) | 0.20 | 0.08 | |
| Dom | 3.88 (–1.57, 9.33) | 0.16 | 0.08 | |
| 17778257 | Add | –4.39 (–8.40, –0.38) | | 0.02 |
| Rec | –4.26 (–14.19, 5.68) | 0.40 | –0.01 | |
| Dom | –5.98 (–11.09, –0.87) | | 0.03 | |
| 2895795 | Add | 1.52 (–2.16, 5.20) | 0.41 | 0.05 |
| Rec | 0.91 (–6.47, 8.30) | 0.81 | 0.04 | |
| Dom | 2.49 (–2.60, 7.57) | 0.33 | 0.05 | |
| 2400707 | Add | 2.56 (–1.08, 6.21) | 0.17 | 0.08 |
| Rec | 3.89 (–2.68, 10.45) | 0.24 | 0.07 | |
| Dom | 3.03 (–2.42, 8.49) | 0.27 | 0.07 | |
| 2053044 | Add | 2.45 (–0.94, 5.84) | 0.15 | 0.01 |
| Rec | 5.51 (–0.46, 11.49) | 0.07 | 0.02 | |
| Dom | 1.58 (–3.55, 6.71) | 0.54 | 0.00 | |
| 12654778 | Add | –4.52 (–8.28, –0.75) | | 0.04 |
| Rec | –4.63 (–14.34, 5.08) | 0.35 | 0.00 | |
| Dom | –5.87 (–10.54, –1.20) | | 0.04 | |
| 11168070 | Add | 5.99 (1.12, 10.85) | | 0.04 |
| Rec | N/A∗∗ | N/A | N/A | |
| Dom | 5.67 (0.58, 10.76) | | 0.03 | |
| 11959427 | Add | 5.69 (0.82, 10.56) | | 0.05 |
| Rec | N/A | N/A | N/A | |
| Dom | 5.34 (0.23, 10.46) | | 0.05 | |
| 1042711 | Add | 10.86 (4.85,16.86) | | 0.09 |
| Rec | N/A | N/A | N/A | |
| Dom | 11.28 (4.74, 17.81) | | 0.08 | |
| 1801704 | Add | 5.26 (0.49, 10.02) | | 0.03 |
| Rec | N/A | N/A | N/A | |
| Dom | 4.89 (–0.10, 9.87) | 0.055 | 0.02 | |
| 1042713 | Add | –5.73 (–9.24, –2.23) | | 0.15 |
| Rec | –8.53 (–14.33, –2.72) | | 0.13 | |
| Dom | –6.62 (–12.38, –0.86) | | 0.10 | |
| 1042717 | Add | 1.96 (–1.63, 5.55) | 0.28 | 0.08 |
| Rec | 3.51 (–3.62, 10.64) | 0.33 | 0.08 | |
| Dom | 2.23 (–2.97, 7.43) | 0.40 | 0.07 | |
| 1042718 | Add | 0.89 (–2.74, 4.51) | 0.63 | –0.01 |
| Rec | 0.74 (–6.49, 7.97) | 0.84 | –0.01 | |
| Dom | 1.39 (–3.72, 6.49) | 0.59 | –0.01 | |
| 1042719 | Add | –0.42 (–4.20, 3.36) | 0.83 | –0.02 |
| Rec | 0.38 (–7.13, 7.90) | 0.92 | –0.02 | |
| Dom | –1.01 (–6.28, 4.26) | 0.71 | –0.02 | |
| 1042720 | Add | –0.29 (–3.72, 3.13) | 0.87 | 0.00 |
| Rec | –1.35 (–7.41, 4.71) | 0.66 | 0.00 | |
| Dom | 0.31 (–4.83, 5.44) | 0.91 | 0.00 | |
FIGURE 1Multiple linear regression models evaluating the effects of ADRB2 SNPs on CPI. SNPs are in the order of ADRB2 5′→3′. Unstandardized regression coefficients with 95% confidence intervals for additive, recessive and dominant models are shown for each SNP. The major alleles are the reference genotypes in the analyses. Open symbols are significant associations (p < 0.05).
Negative binomial regression model evaluating the effects of ADRB2 SNPs on utilizations.
| dbSNP ID | Model | IRR (95% CI)∗ | |
|---|---|---|---|
| 11958940 | Add | 1.02 (0.77, 1.35) | 0.89 |
| Rec | 0.87 (0.54, 1.42) | 0.58 | |
| Dom | 1.15 (0.76, 1.74) | 0.50 | |
| 1432622 | Add | 0.96 (0.72, 1.27) | 0.75 |
| Rec | 0.83 (0.50, 1.37) | 0.46 | |
| Dom | 1.03 (0.68, 1.55) | 0.90 | |
| 17778257 | Add | 0.93 (0.69, 1.25) | 0.63 |
| Rec | 0.77 (0.37, 1.58) | 0.47 | |
| Dom | 0.96 (0.66, 1.38) | 0.81 | |
| 2895795 | Add | 1.01 (0.75, 1.37) | 0.93 |
| Rec | 0.84 (0.47, 1.49) | 0.55 | |
| Dom | 1.11 (0.75, 1.67) | 0.60 | |
| 2400707 | Add | 1.00 (0.75, 1.34) | 0.10 |
| Rec | 0.81 (0.49, 1.33) | 0.40 | |
| Dom | 1.16 (0.77, 1.77) | 0.48 | |
| 2053044 | Add | 0.99 (0.77, 1.28) | 0.96 |
| Rec | 1.03 (0.66, 1.60) | 0.91 | |
| Dom | 0.97 (0.66, 1.42) | 0.86 | |
| 12654778 | Add | 0.95 (0.71, 1.28) | 0.73 |
| Rec | 0.77 (0.36, 1.61) | 0.48 | |
| Dom | 0.98 (0.69, 1.41) | 0.93 | |
| 11168070 | Add | 1.17 (0.82, 1.67) | 0.38 |
| Rec | N/A∗∗ | N/A | |
| Dom | 1.16 (0.79, 1.69) | 0.45 | |
| 11959427 | Add | 1.17 (0.82, 1.68) | 0.38 |
| Rec | N/A | N/A | |
| Dom | 1.16 (0.79, 1.69) | 0.45 | |
| 1042711 | Add | 1.41 (0.91, 2.19) | 0.13 |
| Rec | N/A | N/A | |
| Dom | 1.43 (0.89, 2.32) | 0.14 | |
| 1801704 | Add | 1.13 (0.79, 1.61) | 0.52 |
| Rec | N/A | N/A | |
| Dom | 1.10 (0.75, 1.62) | 0.61 | |
| 1042713 | Add | 0.90 (0.67, 1.20) | 0.47 |
| Rec | 0.76 (0.47, 1.23) | 0.26 | |
| Dom | 0.98 (0.63, 1.52) | 0.92 | |
| 1042717 | Add | 1.05 (0.79, 1.41) | 0.72 |
| Rec | 0.75 (0.44, 1.29) | 0.29 | |
| Dom | 1.29 (0.87, 1.92) | 0.21 | |
| 1042718 | Add | 1.05 (0.79, 1.39) | 0.75 |
| Rec | 0.73 (0.42, 1.24) | 0.24 | |
| Dom | 1.26 (0.87, 1.84) | 0.23 | |
| 1042719 | Add | 1.00 (0.75, 1.33) | 0.98 |
| Rec | 0.80 (0.46, 1.39) | 0.43 | |
| Dom | 1.11 (0.75, 1.63) | 0.62 | |
| 1042720 | Add | 1.04 (0.80, 1.35) | 0.76 |
| Rec | 1.02 (0.64, 1.62) | 0.95 | |
| Dom | 1.08 (0.74, 1.58) | 0.69 | |
Ordinal logistic regression models evaluating effects of ADRB2 SNPs on utilization.
| dbSNP ID | Model | Estimate (95% CI)∗ | |
|---|---|---|---|
| 11958940 | Add | 0.13 (–0.41, 0.67) | 0.63 |
| Rec | 0.40 (–0.58, 1.38) | 0.42 | |
| Dom | 0.02 (–0.78, 0.81) | 0.96 | |
| 1432622 | Add | 0.03 (–0.52, 0.57) | 0.92 |
| Rec | 0.25 (–0.75, 1.24) | 0.62 | |
| Dom | –.0.11 (–0.90, 0.69) | 0.79 | |
| 17778257 | Add | –0.16 (–0.74, 0.41) | 0.58 |
| Rec | 0.52 (–0.95, 1.99) | 0.49 | |
| Dom | –0.40 (–1.13, 0.33) | 0.29 | |
| 2895795 | Add | –0.07 (–0.60, 0.46) | 0.79 |
| Rec | –0.06 (–1.12, 0.99) | 0.91 | |
| Dom | –0.11 (–0.84, 0.62) | 0.77 | |
| 2400707 | Add | 0.08 (–0.45, –0.60) | 0.77 |
| Rec | 0.23 (–0.72, 1.17) | 0.64 | |
| Dom | 0.02 (–0.76, 0.80) | 0.96 | |
| 2053044 | Add | 0.07 (–0.42, 0.55) | 0.79 |
| Rec | 0.34 (–0.52, 1.21) | 0.44 | |
| Dom | –0.10 (–0.82, 0.63) | 0.79 | |
| 12654778 | Add | –0.19 (–0.74, 0.36) | 0.50 |
| Rec | 0.60 (–0.89, 2.09) | 0.43 | |
| Dom | –0.43 (–1.11, 0.26) | 0.22 | |
| 11168070 | Add | 0.24 (–0.46, 0.95) | 0.49 |
| Rec | | N/A | |
| Dom | 0.18 (–0.55, 0.91) | 0.62 | |
| 11959427 | Add | 0.21 (–0.50, 0.92) | 0.56 |
| Rec | | N/A | |
| Dom | 0.15 (–0.59, 0.88) | 0.70 | |
| 1042711 | Add | 0.58 (–0.34, 1.51) | 0.21 |
| Rec | | N/A | |
| Dom | 0.53 (–0.46, 1.51) | 0.29 | |
| 1801704 | Add | 0.15 (–0.55, 0.85) | 0.67 |
| Rec | | N/A | |
| Dom | 0.08 (–0.65, 0.80) | 0.83 | |
| 1042713 | Add | –0.22 (–0.75, 0.31) | 0.42 |
| Rec | –0.27 (–1.13, 0.60) | 0.55 | |
| Dom | –0.30 (–1.15, 0.55) | 0.49 | |
| 1042717 | Add | 0.05 (–0.47, 0.57) | 0.85 |
| Rec | –0.17 (–1.20, 0.85) | 0.74 | |
| Dom | 0.20 (–0.55, 0.95) | 0.60 | |
| 1042718 | Add | 0.10 (–0.41, 0.61) | 0.70 |
| Rec | –0.06 (–1.06, 0.95) | 0.91 | |
| Dom | 0.23 (–0.48, 0.94) | 0.52 | |
| 1042719 | Add | 0.09 (–0.43, 0.61) | 0.74 |
| Rec | –0.07 (–1.10, 0.97) | 0.90 | |
| Dom | 0.19 (–0.53, 0.92) | 0.61 | |
| 1042720 | Add | –0.10 (–0.58, 0.38) | 0.68 |
| Rec | –0.02 (–0.87, 0.83) | 0.96 | |
| Dom | –0.21 (–0.94, 0.51) | 0.57 | |
FIGURE 2Linkage disequilibrium plot of ADRB2 SNPs. Haplotype block organization of 16 ADRB2 SNPs generated from Haploview 4.2 using the standard color scheme with the plot displaying D′ values, i.e., the linkage disequilibrium coefficients. Red = high D′ and high LOD, white = low D′, and low LOD; blue = high D′ and low LOD; shades of pink/red = low D′ and high LOD. Haplotype blocks did not change when four non-African American subjects were excluded.
Haplotype frequencies and CPI association analyses.
| Block (marker #)∗ | Haplotype name | Haplotype | Frequency (%) | ||
|---|---|---|---|---|---|
| Block 1 (1–11) | A | TCAAGGGCTTT | 32.1 | 0.79 | 0.65 |
| B | TCTTGGACTTT | 23.7 | –4.29 | ||
| C | ATATAAGCTTT | 24.8 | –0.82 | 0.69 | |
| D | ATATAAGGCTC | 8.7 | –1.23 | 0.71 | |
| E | ATATAAGGCCC | 7.0 | 11.50 | ||
| Block 2 (12, 13) | GA | 32.9 | 2.14 | 0.24 | |
| AG | 48.1 | –6.03 | | ||
| GG | 18.4 | 6.49 | | ||
| Block 3 (14, 15) | AC | 29.6 | 1.20 | 0.56 | |
| CC | 3.8 | –8.67 | 0.052 | ||
| CG | 65.8 | 0.81 | 0.68 | ||