Literature DB >> 30835791

ProGlycProt V2.0, a repository of experimentally validated glycoproteins and protein glycosyltransferases of prokaryotes.

Pravinkumar Choudhary1, Rupa Nagar1, Vaidhvi Singh1, Aadil Hussain Bhat1, Yogita Sharma1, Alka Rao1.   

Abstract

Knowledge of glycosylation status and glycan-pattern of proteins are of considerable medical, academic and application interest. ProGlycProt V2.0 (www.proglycprot.org) therefore, is conceived and maintained as an exclusive web-resource providing comprehensive information on experimentally validated glycoproteins and protein glycosyltransferases (GTs) of prokaryotic origin. The second release of ProGlycProt features a major update with a 191% increase in the total number of entries, manually collected and curated from 607 peer-reviewed publications, on the subject. Protein GTs from prokaryotes that catalyze a varied range of glycan linkages are amenable glycoengineering tools. Therefore, the second release presents content that is greatly expanded and reorganized in two sub-databases: ProGPdb and ProGTdb. While ProGPdb provides information about validated glycoproteins (222 entries), ProGTdb catalogs enzymes/proteins that are instrumental in protein glycosylation, directly (122) or as accessory proteins (182). ProGlycProt V2.0 remains highly cross-referenced yet exclusive and complementary in content to other related databases. The second release further features enhanced search capability, a "compare" entries option and an innovative geoanalytical tool (MapView) facilitating location-assisted search-cum filtering of the entries using geo-positioning information of researchers/groups cited in the ProGlycProt V2.0 databases. Thus, ProGlycProt V2.0 continues to serve as a useful one-point web-resource on various evidence-based information on protein glycosylation in prokaryotes.
© The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  archaea; bacteria; glycosyltransferase; prokaryotic glycoproteins; protein glycosylation

Mesh:

Substances:

Year:  2019        PMID: 30835791     DOI: 10.1093/glycob/cwz013

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  4 in total

1.  ProCarbDB: a database of carbohydrate-binding proteins.

Authors:  Liviu Copoiu; Pedro H M Torres; David B Ascher; Tom L Blundell; Sony Malhotra
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

Review 2.  Three-Dimensional Structures of Carbohydrates and Where to Find Them.

Authors:  Sofya I Scherbinina; Philip V Toukach
Journal:  Int J Mol Sci       Date:  2020-10-18       Impact factor: 5.923

3.  Comprehensive glycoproteomics shines new light on the complexity and extent of glycosylation in archaea.

Authors:  Stefan Schulze; Friedhelm Pfeiffer; Benjamin A Garcia; Mechthild Pohlschroder
Journal:  PLoS Biol       Date:  2021-06-17       Impact factor: 8.029

Review 4.  Glycan-mediated molecular interactions in bacterial pathogenesis.

Authors:  Sohyoung Lee; Sean Inzerillo; Gi Young Lee; Erick M Bosire; Saroj K Mahato; Jeongmin Song
Journal:  Trends Microbiol       Date:  2021-07-14       Impact factor: 17.079

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.