| Literature DB >> 30828277 |
Jelena Latinović1, Sebastjan Radišek2, Milija Bajčeta3, Jernej Jakše4, Nedeljko Latinović1.
Abstract
Symptoms of fig mosaic disease have been noticed on leaves of fig (Ficus carica) for several decades, in Montenegro. In 2014, leaf samples were collected from trees of six fig cultivars in a plantation located in the main fig-producing area of Montenegro, to study the disease. After RNA isolation, samples were tested by RT-PCR for detection of nine fig viruses and three viroids. Four viruses were detected: fig leaf mottle-associated virus 1 (FLMaV-1), fig mosaic virus (FMV), fig mild mottle-associated-virus (FMMaV) and fig badnavirus 1 (FBV-1). Most of the viruses were present in mixed infections. The amplicons of the viruses were directly sequenced from both directions. A BLAST search of these sequences revealed sequence identities with their closest counterparts at GenBank of 92, 97, 92 and 100%, for FLMaV-1, FMV, FMMaV and FBV-1, respectively. Different responses in symptom expression due to the various virus combinations detected have been demonstrated. Variety Sušilica had the least symptom expression, with only one virus (FBV-1) found. Considering that the production of figs in Montenegro is increasing and has a substantial relevance in this geographic location, the results indicate that more attention should be given to improving the phytosanitary condition of fig trees in the country.Entities:
Keywords: Montenegro; RT-PCR and sequencing; fig varieties; fig viruses
Year: 2019 PMID: 30828277 PMCID: PMC6385650 DOI: 10.5423/PPJ.OA.04.2018.0058
Source DB: PubMed Journal: Plant Pathol J ISSN: 1598-2254 Impact factor: 1.795
Fig. 1Map of the survey area in Montenegro where the infected fig trees were located.
List of primers used in RT-PCR for fig viruses and viroids
| Viruses and viroids | Primers* | Primer sequences (5′ 3′) | Amplified product (bp) | Reference |
|---|---|---|---|---|
| FMV | EMARV-GP-s | GGGTACATATGCGTCATTCTTG | 470 | |
| EMARV-GP-a | CGTTTGTCTTGGATCACAGCAA | |||
| FLV-1 | CPtr-s | CCATCTTCACCACACAAATGTC | 389 | |
| CPtr-a | CAATCTTCTTGGCCTCCATAAG | |||
| FLMaV-1 | N17-s | CGTGGCTGATGCAAAGTTTA | 350 | |
| N17-a | GTTAACGCATGCTTCCATGA | |||
| FLMaV-2 | F3-s | GAACAGTGCCTATCAGTTTGATTTG | 360 | |
| F3-a | TCCCACCTCCTGCGAAGCTAGAGAA | |||
| FLMaV-3 | FLMaV-3sF | CTGTATCTGTCATTACCTCTTCGGG | 375 | |
| FLMaV-3sR | CTGTATCTGTCATTACCTCTTCGGG | |||
| FMMaV | LM3-s | AAGGGGAATCTACAAGGGTCG | 311 | |
| LM3-a | TATTACGCGCTTGAGGATTGC | |||
| FBV-1 | 1094F | ACCAGACGGAGGGAAGAAAT | 474 | |
| 1567R | TCCTTGCCATCGGTTATCTC | |||
| FCV | R1-s | TCGGATTGTCTTTGGAGAGG | 353 | |
| R1-a | CGCATCCACAGTATCCCATT | |||
| FFkaV | D8-s | TCAATCCCAAGGAGGTGAAG | 270 | |
| D8-a | ACACGGTCAATGAGGGAGTC | |||
| HSVd | 78P | AACCCGGGGCAACTCTTCTC | 303 | |
| 83M | AACCCGGGGCTCCTTTCTCA | |||
| CEVd | CEVd- F | GGAAACCTGGAGGAAGTCG | 371 | |
| CEVd- R | CCGGGGATCCCTGAAGGA | |||
| ADFVd | ADFVd- for | CCCCCCTGCGCTACTGACTAAAAG | 262 | |
| ADFVd- rev | GTGTTTTACCCTGGAGGCTCCACTC |
Incidence of fig viruses detected in leaves of the sampled trees of different fig varieties in the orchard of Podgorica region in Montenegro and presence of symptoms
| Variety | Tree No. | FMMaV (KX397034 | FLMaV-1 (KX397035 | FMV (KX397036 | FBV-1 (MG584625 | Symptoms |
|---|---|---|---|---|---|---|
| Izraelka | 1 | − | + | + | + | Present |
| 2 | − | + | + | + | Present | |
| (3) | − | + | + | + | Present | |
| (4) | − | + | + | + | Present | |
| 5 | − | + | + | + | Present | |
| Jesenka | 1 | − | + | − | + | Present |
| 2 | − | + | + | + | Present | |
| 3 | − | + | − | − | Present | |
| (4) | + | + | − | + | Present | |
| 5 | − | + | − | + | Present | |
| Trojka | 1 | − | + | − | + | None |
| 2 | − | + | − | + | Present | |
| (3) | + | + | + | + | Present | |
| Sušilica | 1 | − | − | − | + | Present |
| 2 | − | − | − | + | None | |
| 3 | − | − | − | + | None | |
| (4) | − | − | − | + | Present | |
| 5 | − | − | − | + | None | |
| Kalamata | (1) | + | + | − | + | Present |
| 2 | − | + | + | + | Present | |
| 3 | + | + | − | + | Present | |
| 4 | + | + | − | + | Present | |
| (5) | + | + | + | + | Present | |
| Sultanija | 1 | − | + | − | + | Present |
| 2 | − | + | − | + | Present | |
| 3 | − | + | − | + | Present | |
| (4) | + | + | + | + | Present | |
| (5) | + | + | + | + | Present |
GenBank accession No.; ( ) tree samples chosen for sequencing of RT-PCR amplicons for each detected virus.
Fig. 2Leaves of different fig varieties with predominant symptoms accompanied by appropriate binary images. (A) Izraelka, (B) Sultanija, (C) Jesenka, (D) Trojka, (E) Kalamata, (F) Sušilica.
Percentage of the leaf area with fig mosaic disease symptoms
| Fig variety | Average percentage of the leaf area with symptoms | The range of values per individual leaf |
|---|---|---|
| Izraelka | 15.9 | 14.2–24.9 |
| Jesenka | 10.3 | 10.1–19.5 |
| Kalamata | 12.2 | 9.3–21.0 |
| Sultanija | 16.3 | 10.1–24.9 |
| Trojka | 11.8 | 0.0–20.5 |
| Sušilica | 3.3 | 0.0–12.9 |