Literature DB >> 30826937

Temperature adaptation of DNA ligases from psychrophilic organisms.

Kristel Berg1, Ingar Leiros1, Adele Williamson2.   

Abstract

DNA ligases operating at low temperatures have potential advantages for use in biotechnological applications. For this reason, we have characterized the temperature optima and thermal stabilities of three minimal Lig E-type ATP-dependent DNA ligase originating from Gram-negative obligate psychrophilic bacteria. The three ligases, denoted Vib-Lig, Psy-Lig, and Par-Lig, show a remarkable range of thermal stabilities and optima, with the first bearing all the hallmarks of a genuinely cold-adapted enzyme, while the latter two have activity and stability profiles more typical of mesophilic proteins. A comparative approach based on sequence comparison and homology modeling indicates that the cold-adapted features of Vib-Lig may be ascribed to differences in surface charge rather than increased local or global flexibility which is consistent with the contemporary emerging paradigm of the physical basis of cold adaptation of enzymes.

Entities:  

Keywords:  ATP-dependent DNA ligase; Enzyme activity; Psychrophile; Temperature optima

Mesh:

Substances:

Year:  2019        PMID: 30826937     DOI: 10.1007/s00792-019-01082-y

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  5 in total

Review 1.  Industrial applications of cold-adapted enzymes: challenges, innovations and future perspective.

Authors:  Anil Kumar; Srijana Mukhia; Rakshak Kumar
Journal:  3 Biotech       Date:  2021-09-06       Impact factor: 2.893

2.  Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.

Authors:  Adele Williamson; Hanna-Kirsti S Leiros
Journal:  Nucleic Acids Res       Date:  2019-08-22       Impact factor: 16.971

3.  Bacteriophage origin of some minimal ATP-dependent DNA ligases: a new structure from Burkholderia pseudomallei with striking similarity to Chlorella virus ligase.

Authors:  Jolyn Pan; Kjersti Lian; Aili Sarre; Hanna-Kirsti S Leiros; Adele Williamson
Journal:  Sci Rep       Date:  2021-09-21       Impact factor: 4.379

4.  Response to Cold: A Comparative Transcriptomic Analysis in Eight Cold-Adapted Yeasts.

Authors:  Marcelo Baeza; Sergio Zúñiga; Vicente Peragallo; Fernando Gutierrez; Salvador Barahona; Jennifer Alcaino; Víctor Cifuentes
Journal:  Front Microbiol       Date:  2022-02-23       Impact factor: 5.640

Review 5.  Industrial Biotechnology Based on Enzymes From Extreme Environments.

Authors:  Noha M Mesbah
Journal:  Front Bioeng Biotechnol       Date:  2022-04-05
  5 in total

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